[med-svn] [Git][med-team/bcftools][master] 8 commits: routine-update: New upstream version

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / bcftools


Commits:
9e509566 by Étienne Mollier at 2023-06-23T18:12:25+02:00
routine-update: New upstream version

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0c78f4bc by Étienne Mollier at 2023-06-23T18:12:26+02:00
New upstream version 1.17
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8abb0708 by Étienne Mollier at 2023-06-23T18:12:39+02:00
Update upstream source from tag 'upstream/1.17'

Update to upstream version '1.17'
with Debian dir cf539863f50773f7bf026cbdbc01acfeacb5dfa2
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dcbcb605 by Étienne Mollier at 2023-06-23T18:12:40+02:00
routine-update: Standards-Version: 4.6.2

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3c9ebacd by Étienne Mollier at 2023-06-23T18:16:41+02:00
d/lintian-overrides: update mismatched override.

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8f385a9e by Étienne Mollier at 2023-06-23T18:18:15+02:00
2to3.patch: declare forwarding unneeded.

Only changes are the shebang and future import, making the initial
script somewhat agnistic of the python major version, and the patch
enforces use of python3.

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09a62eaf by Étienne Mollier at 2023-06-23T18:25:11+02:00
skip_new_test_failing_on_32bit.patch: use the Bug field.

The patch was initially documenting upstream issue with a Bug-Upstream
field instead of using the dedicated Bug field from DEP3, confusing
scanners to identify outstanding problems left to forward upstream.

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c94f45cc by Étienne Mollier at 2023-06-23T18:54:45+02:00
ready to upload to unstable.

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20 changed files:

- LICENSE
- Makefile
- NEWS
- abuf.c
- bam2bcf.c
- bam2bcf.h
- + bam2bcf_iaux.c
- bam2bcf_indel.c
- bcftools.h
- + cigar_state.h
- consensus.c
- convert.c
- csq.c
- debian/changelog
- debian/control
- debian/lintian-overrides
- debian/patches/2to3.patch
- debian/patches/skip_new_test_failing_on_32bit.patch
- doc/bcftools.1
- doc/bcftools.html


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bcftools/-/compare/9561fa5a44c92d3a29630c4631b24b3789ab0eed...c94f45cc0ef4055105be40e27d45798889f5b366

-- 
View it on GitLab: https://salsa.debian.org/med-team/bcftools/-/compare/9561fa5a44c92d3a29630c4631b24b3789ab0eed...c94f45cc0ef4055105be40e27d45798889f5b366
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