[med-svn] [Git][med-team/python-treetime][master] 5 commits: New upstream version 0.11.1

[Ananthu C V (@weepingclown)]

Ananthu C V pushed to branch master at Debian Med / python-treetime


Commits:
bc7ed4de by Ananthu C V at 2023-11-01T01:09:00+05:30
New upstream version 0.11.1
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8b15affb by Ananthu C V at 2023-11-01T01:09:15+05:30
Update upstream source from tag 'upstream/0.11.1'

Update to upstream version '0.11.1'
with Debian dir a3dc43bf0fab912644a03a17b8ed011b4b9453bd
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c881c097 by Ananthu C V at 2023-11-01T01:18:56+05:30
Bump Standards-Version to 4.6.2 (no changes needed)

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7a02acec by Ananthu C V at 2023-11-01T01:52:47+05:30
Create a patch to remove warning on shell script by adding shebang

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292ddef8 by Ananthu C V at 2023-11-01T01:54:54+05:30
Update changelog

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30 changed files:

- README.md
- changelog.md
- debian/changelog
- debian/control
- + debian/patches/series
- + debian/patches/shebang.patch
- docs/source/tutorials/timetree.rst
- setup.py
- test.sh
- test/command_line_tests.sh
- + test/test_sequence_evolution_model.txt
- test/test_treetime.py
- + treetime/CLI_io.py
- treetime/__init__.py
- treetime/__main__.py
- treetime/argument_parser.py
- + treetime/clock_filter_methods.py
- treetime/clock_tree.py
- treetime/distribution.py
- treetime/gtr.py
- treetime/gtr_site_specific.py
- treetime/merger_models.py
- treetime/node_interpolator.py
- treetime/seq_utils.py
- treetime/seqgen.py
- treetime/treeanc.py
- treetime/treeregression.py
- treetime/treetime.py
- treetime/utils.py
- treetime/vcf_utils.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-treetime/-/compare/ecd6e26872f9bb5bf1b5f657e40f7940d3d6a78f...292ddef8e709232ea118c10cc72c3fc74dd43fa3

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View it on GitLab: https://salsa.debian.org/med-team/python-treetime/-/compare/ecd6e26872f9bb5bf1b5f657e40f7940d3d6a78f...292ddef8e709232ea118c10cc72c3fc74dd43fa3
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