[med-svn] [Git][med-team/pbbam][upstream] New upstream version 2.4.0+dfsg

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / pbbam


Commits:
ac80c20d by Andreas Tille at 2023-11-08T16:45:34+01:00
New upstream version 2.4.0+dfsg
- - - - -


30 changed files:

- CHANGELOG.md
- include/meson.build
- include/pbbam/BamRecordImpl.h
- include/pbbam/Config.h
- include/pbbam/ReadGroupInfo.h
- + include/pbbam/csv/CsvReader.h
- + include/pbbam/csv/CsvTypes.h
- + include/pbbam/csv/CsvWriter.h
- meson.build
- src/BamHeader.cpp
- src/BamRecordImpl.cpp
- src/Config.cpp
- src/IndexedBamWriter.cpp
- src/ReadGroupInfo.cpp
- src/SamWriter.cpp
- + src/csv/CsvReader.cpp
- + src/csv/CsvWriter.cpp
- src/meson.build
- subprojects/gtest.wrap
- subprojects/htslib.wrap
- subprojects/zlib.wrap
- + tests/data/csv/comma_separated.csv
- + tests/data/csv/comma_separated.csv.gz
- + tests/data/csv/missing_fields.csv
- + tests/data/csv/tab_separated.csv
- + tests/data/csv/tab_separated.csv.gz
- + tests/data/csv/too_many_fields.csv
- tests/src/cram/pbbamify.t.in
- tests/src/cram/pbmerge_fofn.t.in
- tests/src/meson.build


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/pbbam/-/commit/ac80c20d9a9c97af8d25dad206945bbdf5f92836

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