[med-svn] [Git][med-team/ncbi-vdb][master] 7 commits: New upstream version

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / ncbi-vdb


Commits:
059bd2e9 by Andreas Tille at 2024-12-12T09:55:38+01:00
New upstream version

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aa936e09 by Andreas Tille at 2024-12-12T09:55:39+01:00
New upstream version 3.1.1+dfsg
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dc8df141 by Andreas Tille at 2024-12-12T09:55:48+01:00
Update upstream source from tag 'upstream/3.1.1+dfsg'

Update to upstream version '3.1.1+dfsg'
with Debian dir 0e5b9ceb58204d66b2cd050ced4957c10c2fe962
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c264be8f by Andreas Tille at 2024-12-12T09:55:49+01:00
Standards-Version: 4.7.0 (routine-update)

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30b642bc by Andreas Tille at 2024-12-12T09:57:48+01:00
Update patches

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3b3d2200 by Andreas Tille at 2024-12-12T10:56:31+01:00
d/copyright: update according to lrc

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1055c9c8 by Andreas Tille at 2024-12-12T11:57:53+01:00
Upload to experimental

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30 changed files:

- CHANGES.md
- build/Makefile.vers
- build/env.cmake
- build/install-root.sh
- debian/changelog
- debian/control
- debian/copyright
- debian/patches/detect_BITS.patch
- debian/patches/fix_cmake.patch
- debian/patches/fix_x32.patch
- interfaces/kdb/consistency-check.h
- interfaces/kdb/manager.h
- interfaces/klib/vdb_release_version.h
- interfaces/kns/http.h
- interfaces/kns/socket.h
- + interfaces/os/bsd/byteswap.h
- + interfaces/os/bsd/endian.h
- + interfaces/os/bsd/os-native.h
- interfaces/vdb/vdb-priv.h
- interfaces/vfs/services-priv.h
- libs/CMakeLists.txt
- libs/align/al_iterator.c
- libs/align/align-access.c
- libs/align/bam.c
- libs/align/pl_iterator.c
- libs/align/reader-refseq.c
- libs/align/reader-wgs.c
- libs/align/reader-wgs.h
- libs/align/ref_iterator.c
- libs/align/reference-cmn.c


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/ncbi-vdb/-/compare/42262dca0463c7e986b4e4349204fb6819001ff7...1055c9c8d9f039e45015fc2a29773d7c2ea87ce6

-- 
View it on GitLab: https://salsa.debian.org/med-team/ncbi-vdb/-/compare/42262dca0463c7e986b4e4349204fb6819001ff7...1055c9c8d9f039e45015fc2a29773d7c2ea87ce6
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