[med-svn] [Git][med-team/macs][master] 5 commits: routine-update: New upstream version

[Michael R. Crusoe (@crusoe)]

Michael R. Crusoe pushed to branch master at Debian Med / macs


Commits:
a99a4a42 by Michael R. Crusoe at 2024-02-23T14:26:24+01:00
routine-update: New upstream version

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cb1a4de2 by Michael R. Crusoe at 2024-02-23T14:26:29+01:00
New upstream version 3.0.1
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9198c112 by Michael R. Crusoe at 2024-02-23T14:41:26+01:00
Update upstream source from tag 'upstream/3.0.1'

Update to upstream version '3.0.1'
with Debian dir d71b4a564f4a407a122c8580270458279d02ef5d
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46e5b22e by Michael R. Crusoe at 2024-02-23T16:32:19+01:00
d/patch/no_install_depends_cython.patch removed, applied upstream.

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4b0afdeb by Michael R. Crusoe at 2024-02-23T16:33:26+01:00
Remove duplicate line from changelog.

Changes-By: lintian-brush

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30 changed files:

- .github/workflows/build-and-test-MACS3-macos12.yml → .github/workflows/build-and-test-MACS3-macos.yml
- + .github/workflows/build-and-test-MACS3-non-x64-others.yml
- .github/workflows/build-and-test-MACS3-non-x64.yml
- + .github/workflows/build-and-test-MACS3-website.yml
- .github/workflows/build-and-test-MACS3-x64.yml
- .github/workflows/publish-to-anaconda.yml
- + .github/workflows/publish-to-gh-with-sphinx.yml
- .github/workflows/publish-to-pypi.yml
- .gitignore
- CONTRIBUTING.md
- ChangeLog
- MACS3/Commands/hmmratac_cmd.py
- MACS3/Signal/HMMR_HMM.pyx
- MACS3/Signal/Region.pyx
- MACS3/Utilities/Constants.py
- README.md
- − _config.yml
- conda/macs3/meta.yaml
- debian/changelog
- debian/control
- − debian/patches/no_install_depends_cython.patch
- debian/patches/series
- docs/Advanced_Step-by-step_Peak_Calling.md
- docs/INSTALL.md
- + docs/Makefile
- docs/bdgdiff.md
- docs/callvar.md
- + docs/make.bat
- docs/pileup.md
- docs/qa.md


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/macs/-/compare/1d1c7cedc0d230f721e8752f797822f328f26b32...4b0afdebec23eef182dd363ff8023e10a84a716b

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View it on GitLab: https://salsa.debian.org/med-team/macs/-/compare/1d1c7cedc0d230f721e8752f797822f328f26b32...4b0afdebec23eef182dd363ff8023e10a84a716b
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