[med-svn] [Git][med-team/igv][upstream] New upstream version 2.17.3+dfsg

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / igv


Commits:
5df86c7d by Andreas Tille at 2024-03-08T08:46:43+01:00
New upstream version 2.17.3+dfsg
- - - - -


30 changed files:

- README.md
- scripts/igv.command
- scripts/igv.sh
- src/main/java/org/broad/igv/feature/genome/ChromAliasBB.java
- src/main/java/org/broad/igv/feature/genome/CytobandMap.java
- src/main/java/org/broad/igv/feature/genome/CytobandSource.java
- src/main/java/org/broad/igv/feature/genome/CytobandSourceBB.java
- src/main/java/org/broad/igv/feature/genome/Genome.java
- src/main/java/org/broad/igv/prefs/PreferencesManager.java
- src/main/java/org/broad/igv/sam/AlignmentRenderer.java
- src/main/java/org/broad/igv/sam/AlignmentTrackMenu.java
- src/main/java/org/broad/igv/sam/SAMAlignment.java
- src/main/java/org/broad/igv/sam/SupplementaryAlignment.java
- src/main/java/org/broad/igv/sam/mods/BaseModificationUtils.java
- src/main/java/org/broad/igv/sashimi/SashimiContentPane.java
- src/main/java/org/broad/igv/sashimi/SashimiPlot.java
- src/main/java/org/broad/igv/track/TrackLoader.java
- src/main/java/org/broad/igv/ucsc/bb/BBDataSource.java
- src/main/java/org/broad/igv/ucsc/bb/BBFeatureSource.java
- src/main/java/org/broad/igv/ucsc/bb/BBFile.java
- src/main/java/org/broad/igv/ui/IGVMenuBar.java
- src/main/java/org/broad/igv/ui/action/LoadFromURLMenuAction.java
- + src/main/java/org/broad/igv/ui/action/UCSCGenArkAction.java
- src/main/java/org/broad/igv/ui/commandbar/ChromosomeComboBox.java
- src/main/java/org/broad/igv/ui/commandbar/IGVCommandBar.java
- src/main/java/org/broad/igv/ui/panel/ReferenceFrame.java
- + src/main/java/org/broad/igv/ui/table/SearchableTableDialog.java
- + src/main/java/org/broad/igv/ui/table/SearchableTableModel.java
- + src/main/java/org/broad/igv/ui/table/SearchableTableRecord.java
- src/main/java/org/broad/igv/ui/util/SnapshotUtilities.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/igv/-/commit/5df86c7d789d5c89379aa2b9fbbfcde129d261f6

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View it on GitLab: https://salsa.debian.org/med-team/igv/-/commit/5df86c7d789d5c89379aa2b9fbbfcde129d261f6
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