[med-svn] [Git][med-team/hyphy][master] 6 commits: routine-update: New upstream version

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / hyphy


Commits:
bfa0b899 by Étienne Mollier at 2024-03-10T12:30:32+01:00
routine-update: New upstream version

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22f23a2f by Étienne Mollier at 2024-03-10T12:30:47+01:00
New upstream version 2.5.60+dfsg
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650e2255 by Étienne Mollier at 2024-03-10T12:30:55+01:00
Update upstream source from tag 'upstream/2.5.60+dfsg'

Update to upstream version '2.5.60+dfsg'
with Debian dir 637e3298f86e82b465a67de9378170efd6c5b887
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2d70f7a4 by Étienne Mollier at 2024-03-10T12:32:36+01:00
Unfuzz all patches.

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c4d22556 by Étienne Mollier at 2024-03-10T12:37:00+01:00
d/control: migrate build-dep to pkgconf.

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f1e528d3 by Étienne Mollier at 2024-03-10T12:41:44+01:00
ready to upload to unstable.

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20 changed files:

- CMakeLists.txt
- debian/changelog
- debian/control
- debian/patches/rm_arch_specific_flags.patch
- debian/patches/set-zlib-after-setting-default-libs.patch
- debian/patches/use_debian_sqlite.patch
- res/TemplateBatchFiles/SelectionAnalyses/BUSTED.bf
- res/TemplateBatchFiles/SelectionAnalyses/FEL.bf
- res/TemplateBatchFiles/SelectionAnalyses/FUBAR.bf
- res/TemplateBatchFiles/SelectionAnalyses/RELAX.bf
- res/TemplateBatchFiles/SelectionAnalyses/error-filter.bf
- res/TemplateBatchFiles/SelectionAnalyses/modules/io_functions.ibf
- res/TemplateBatchFiles/SelectionAnalyses/modules/shared-load-file.bf
- res/TemplateBatchFiles/libv3/all-terms.bf
- res/TemplateBatchFiles/libv3/models/codon/MG_REV.bf
- res/TemplateBatchFiles/libv3/models/model_functions.bf
- res/TemplateBatchFiles/libv3/models/parameters.bf
- res/TemplateBatchFiles/libv3/tasks/alignments.bf
- res/TemplateBatchFiles/libv3/tasks/estimators.bf
- res/TemplateBatchFiles/libv3/tasks/mpi.bf


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/compare/0339ccbb62d48ae89f5fe95b29c2186fb5aac43b...f1e528d3386b9e930e0764f62e9d2ee7e0d9c5d9

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View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/compare/0339ccbb62d48ae89f5fe95b29c2186fb5aac43b...f1e528d3386b9e930e0764f62e9d2ee7e0d9c5d9
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