[med-svn] [Git][med-team/pairtools][master] refresh patches

[Alexandre Detiste (@detiste-guest)]

Alexandre Detiste pushed to branch master at Debian Med / pairtools


Commits:
aea162b9 by Alexandre Detiste at 2024-11-18T20:55:34+01:00
refresh patches

- - - - -


1 changed file:

- debian/patches/tests-to-python3


Changes:

=====================================
debian/patches/tests-to-python3
=====================================
@@ -197,9 +197,9 @@ Last-Update: Sun, Jan 1, 2023
                  "split",
 --- a/tests/test_stats.py
 +++ b/tests/test_stats.py
-@@ -5,6 +5,9 @@
- import numpy as np
- import yaml
+@@ -8,6 +8,9 @@
+ import pytest
+ 
  
 +from common_py import getpyvers
 +currpy = getpyvers()
@@ -207,7 +207,7 @@ Last-Update: Sun, Jan 1, 2023
  testdir = os.path.dirname(os.path.realpath(__file__))
  
  
-@@ -12,7 +15,7 @@
+@@ -15,7 +18,7 @@
      mock_pairsam_path = os.path.join(testdir, "data", "mock.4stats.pairs")
      try:
          result = subprocess.check_output(
@@ -216,7 +216,7 @@ Last-Update: Sun, Jan 1, 2023
          ).decode("ascii")
      except subprocess.CalledProcessError as e:
          print(e.output)
-@@ -65,7 +68,7 @@
+@@ -68,7 +71,7 @@
      try:
          subprocess.check_output(
              [
@@ -225,7 +225,7 @@ Last-Update: Sun, Jan 1, 2023
                  "-m",
                  "pairtools",
                  "stats",
-@@ -78,7 +81,7 @@
+@@ -81,7 +84,7 @@
  
          subprocess.check_output(
              [
@@ -234,7 +234,7 @@ Last-Update: Sun, Jan 1, 2023
                  "-m",
                  "pairtools",
                  "stats",
-@@ -90,7 +93,7 @@
+@@ -93,7 +96,7 @@
          )
          subprocess.check_output(
              [
@@ -243,7 +243,7 @@ Last-Update: Sun, Jan 1, 2023
                  "-m",
                  "pairtools",
                  "stats",
-@@ -103,7 +106,7 @@
+@@ -106,7 +109,7 @@
          )
          subprocess.check_output(
              [
@@ -252,7 +252,7 @@ Last-Update: Sun, Jan 1, 2023
                  "-m",
                  "pairtools",
                  "stats",
-@@ -116,7 +119,7 @@
+@@ -119,7 +122,7 @@
          )
          subprocess.check_output(
              [
@@ -315,7 +315,7 @@ Last-Update: Sun, Jan 1, 2023
  testdir = os.path.dirname(os.path.realpath(__file__))
  
  tmpdir = tempfile.TemporaryDirectory()
-@@ -32,7 +35,7 @@
+@@ -47,7 +50,7 @@
      try:
          subprocess.check_output(
              [
@@ -324,7 +324,7 @@ Last-Update: Sun, Jan 1, 2023
                  "-m",
                  "pairtools",
                  "dedup",
-@@ -49,7 +52,7 @@
+@@ -64,7 +67,7 @@
          )
          subprocess.check_output(
              [
@@ -333,7 +333,7 @@ Last-Update: Sun, Jan 1, 2023
                  "-m",
                  "pairtools",
                  "dedup",
-@@ -68,7 +71,7 @@
+@@ -83,7 +86,7 @@
          )
          subprocess.check_output(
              [



View it on GitLab: https://salsa.debian.org/med-team/pairtools/-/commit/aea162b9785aff314dffe9ab9daf8dad906301a1

-- 
View it on GitLab: https://salsa.debian.org/med-team/pairtools/-/commit/aea162b9785aff314dffe9ab9daf8dad906301a1
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