[med-svn] [Git][med-team/genometools][master] 3 commits: add patch to fix building with non-deterministic ordering

[Sascha Steinbiss (@satta)]

Sascha Steinbiss pushed to branch master at Debian Med / genometools


Commits:
343c9516 by Sascha Steinbiss at 2025-11-10T01:07:55+01:00
add patch to fix building with non-deterministic ordering

- - - - -
4cbe684a by Sascha Steinbiss at 2025-11-10T01:08:04+01:00
add missing Origin field

- - - - -
c1c950d6 by Sascha Steinbiss at 2025-11-10T01:08:14+01:00
remove libgenometools0t64.lintian-overrides

- - - - -


5 changed files:

- debian/changelog
- − debian/libgenometools0t64.lintian-overrides
- debian/patches/series
- + debian/patches/shuffle-dependencies.patch
- debian/patches/use-mx32


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+genometools (1.6.6+ds-2) unstable; urgency=medium
+
+  * Add patch to fix building with non-deterministic ordering.
+    Closes: #1105339
+  * Add missing Origin field to patch use-mx32.
+  * Remove libgenometools0t64.lintian-overrides.
+
+ -- Sascha Steinbiss <satta at debian.org>  Mon, 10 Nov 2025 00:35:41 +0100
+
 genometools (1.6.6+ds-1) unstable; urgency=medium
 
   * New upstream release.


=====================================
debian/libgenometools0t64.lintian-overrides deleted
=====================================
@@ -1 +0,0 @@
-libgenometools0t64: package-name-doesnt-match-sonames libgenometools0


=====================================
debian/patches/series
=====================================
@@ -7,3 +7,4 @@ split-manuals
 use-mx32
 gtdoc-traverse-sorted
 ignore-m32-m64.patch
+shuffle-dependencies.patch


=====================================
debian/patches/shuffle-dependencies.patch
=====================================
@@ -0,0 +1,17 @@
+Description: add missing dependencies for gt_config.h
+Author: Sascha Steinbiss <satta at debian.org>
+Forwarded: https://github.com/genometools/genometools/pull/1046
+Last-Update: 2025-11-10
+---
+This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
+--- a/Makefile
++++ b/Makefile
+@@ -854,6 +854,8 @@
+ 	$(V_DO)$(CXX) -c $< -o $(@:.o=.d) $(EXP_CPPFLAGS) $(GT_CPPFLAGS) -MM -MP \
+ 	  -MT $@
+ 
++obj/src/core/option.o: obj/gt_config.h
++obj/src/core/version.o: obj/gt_config.h
+ obj/src/core/versionfunc.o: obj/gt_config.h
+ 
+ # read dependencies


=====================================
debian/patches/use-mx32
=====================================
@@ -1,4 +1,5 @@
 Description: Use mx32
+Origin: vendor
 --- a/Makefile
 +++ b/Makefile
 @@ -358,17 +358,19 @@



View it on GitLab: https://salsa.debian.org/med-team/genometools/-/compare/395b461451fdecbcd18976347c225d1bba48683c...c1c950d604b876921ccb18fc5de7ee0e31cc342b

-- 
View it on GitLab: https://salsa.debian.org/med-team/genometools/-/compare/395b461451fdecbcd18976347c225d1bba48683c...c1c950d604b876921ccb18fc5de7ee0e31cc342b
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