[med-svn] [Git][med-team/nanopolish][master] 6 commits: Standards-Version: 4.7.4 (routine-update)

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / nanopolish


Commits:
9ebb196b by Andreas Tille at 2026-06-11T21:17:02+02:00
Standards-Version: 4.7.4 (routine-update)

- - - - -
d747aa34 by Andreas Tille at 2026-06-11T21:17:15+02:00
Changes made by cme

- - - - -
6b65628e by Andreas Tille at 2026-06-11T21:17:16+02:00
Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)

- - - - -
501a4580 by Andreas Tille at 2026-06-11T21:17:16+02:00
Drop 'Rules-Requires-Root: no' from d/control (routine-update)

- - - - -
312a8a8f by Andreas Tille at 2026-06-11T20:17:17+01:00
Reformat the Last-Update date as ISO YYYY-MM-DD.

Changes-By: lintian-brush
Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/fix_remaining_python_interpreters.patch]
See-also: https://lintian.debian.org/tags/invalid-dep3-format-patch-wrong-last-update.html

- - - - -
48199b0a by Andreas Tille at 2026-06-11T21:18:34+02:00
routine-update: Ready to upload to unstable

- - - - -


4 changed files:

- debian/changelog
- debian/control
- debian/patches/fix_remaining_python_interpreters.patch
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,10 +1,16 @@
-nanopolish (0.14.0-3) UNRELEASED; urgency=medium
+nanopolish (0.14.0-3) unstable; urgency=medium
 
   * d/watch: version=5
   * libeigen 5.0 requires minimum -std=c++14
     Closes: #1136251
-
- -- Andreas Tille <tille at debian.org>  Thu, 11 Jun 2026 20:47:26 +0200
+  * Standards-Version: 4.7.4 (routine-update)
+  * Reflow Uploaders field (cme)
+  * Remove Priority field (cme)
+  * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
+  * Drop 'Rules-Requires-Root: no' from d/control (routine-update)
+  * Reformat the Last-Update date as ISO YYYY-MM-DD.
+
+ -- Andreas Tille <tille at debian.org>  Thu, 11 Jun 2026 21:17:19 +0200
 
 nanopolish (0.14.0-2) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -1,34 +1,37 @@
 Source: nanopolish
+Standards-Version: 4.7.4
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Andreas Tille <tille at debian.org>
+Uploaders:
+ Andreas Tille <tille at debian.org>,
 Section: science
-Priority: optional
-Build-Depends: debhelper-compat (= 13),
-               dh-python,
-               python3,
-               zlib1g-dev,
-               libfast5-dev,
-               libhts-dev,
-               libeigen3-dev,
-               libminimap2-dev,
-               libstreamvbyte-dev,
-               libslow5-dev
-Standards-Version: 4.6.1
+Build-Depends:
+ debhelper-compat (= 13),
+ dh-sequence-python3,
+ python3,
+ zlib1g-dev,
+ libfast5-dev,
+ libhts-dev,
+ libeigen3-dev,
+ libminimap2-dev,
+ libstreamvbyte-dev,
+ libslow5-dev,
 Vcs-Browser: https://salsa.debian.org/med-team/nanopolish
 Vcs-Git: https://salsa.debian.org/med-team/nanopolish.git
 Homepage: https://github.com/jts/nanopolish
-Rules-Requires-Root: no
 
 Package: nanopolish
 Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         ${python3:Depends},
-         ${perl:Depends}
-Recommends: python3-biopython,
-            python3-pysam
-Suggests: perl,
-          make
+Depends:
+ ${shlibs:Depends},
+ ${misc:Depends},
+ ${python3:Depends},
+ ${perl:Depends},
+Recommends:
+ python3-biopython,
+ python3-pysam,
+Suggests:
+ perl,
+ make,
 Description: consensus caller for nanopore sequencing data
  Nanopolish uses a signal-level hidden Markov model for consensus calling
  of nanopore genome sequencing data. It can perform signal-level analysis


=====================================
debian/patches/fix_remaining_python_interpreters.patch
=====================================
@@ -2,7 +2,7 @@ Author: Andreas Tille <tille at debian.org>
 Bug-Debian: https://bugs.debian.org/931784
             https://bugs.debian.org/937105
 Bug-Upstream: https://github.com/jts/nanopolish/issues/626
-Last-Update: Wed, 11 Dec 2019 15:02:32 +0100
+Last-Update: 2019-12-11
 Description: Fix some remaining interpreter names from python to python3
 
 --- a/scripts/dropmodel.py


=====================================
debian/rules
=====================================
@@ -24,7 +24,7 @@ export MINIMAP2=external
 export SLOW5LIB=external
 
 %:
-	dh $@ --with python3
+	dh $@
 
 override_dh_auto_clean:
 	sed -i~ 's/^.depend: .*/.depend:/' Makefile



View it on GitLab: https://salsa.debian.org/med-team/nanopolish/-/compare/e4f90e7e0a43166f6eab49d959647a02366a92ea...48199b0aded0613d6f2afb10959eb9c332fa71c5

-- 
View it on GitLab: https://salsa.debian.org/med-team/nanopolish/-/compare/e4f90e7e0a43166f6eab49d959647a02366a92ea...48199b0aded0613d6f2afb10959eb9c332fa71c5
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