[med-svn] [Git][med-team/libminc][master] 7 commits: refresh patches

Steven Robbins (@smr) gitlab at salsa.debian.org
Sat May 9 17:24:51 BST 2026



Steven Robbins pushed to branch master at Debian Med / libminc


Commits:
f7df70be by Steve Robbins at 2026-05-06T22:43:28-05:00
refresh patches

- - - - -
8040a120 by Steve Robbins at 2026-05-06T22:45:44-05:00
remove obsolete symbols file

- - - - -
9247abd5 by Steve Robbins at 2026-05-06T22:50:29-05:00
Remove dh-exec usage, obsolete with debhelper 13

- - - - -
f92ab53f by Steve Robbins at 2026-05-06T23:07:21-05:00
Remove setting of now-obsolete LIB_SUFFIX.

- - - - -
b0b09b52 by Steve Robbins at 2026-05-07T00:22:30-05:00
Remove additional path layer for installing cmake files

- - - - -
011be7bc by Steve Robbins at 2026-05-09T11:05:10-05:00
adjust install dir for cmake targets file

- - - - -
6eda6f51 by Steve Robbins at 2026-05-09T11:21:15-05:00
Refresh patches.

- - - - -


11 changed files:

- debian/libminc-dev.install
- − debian/libminc2-5.3.0t64.symbols
- − debian/patches/0001-build-using-system-find-dot-cmake.patch
- debian/patches/0002-initialize_arrays_in_tests.patch
- − debian/patches/0003-disable-dimension-test.patch
- debian/patches/0004-Fix-setting-of-LIBMINC_USE_FILE_CONFIG-to-be-correct.patch
- debian/patches/0005-Disable-setting-RPATH.patch
- debian/patches/0006-Drop-hdf5-from_LIBMINC_LIBRARIES_CONFIG.patch
- + debian/patches/0007-Install-cmake-in-LIBMINC
- debian/patches/series
- debian/rules


Changes:

=====================================
debian/libminc-dev.install
=====================================
@@ -1,6 +1,3 @@
-#! /usr/bin/dh-exec
 usr/lib/*/lib*.so
-usr/lib/${DEB_HOST_MULTIARCH}/cmake/*.cmake  usr/lib/${DEB_HOST_MULTIARCH}/cmake/LIBMINC/
+usr/lib/${DEB_HOST_MULTIARCH}/cmake/LIBMINC/*.cmake
 usr/include/*
-
-


=====================================
debian/libminc2-5.3.0t64.symbols deleted
=====================================
@@ -1,876 +0,0 @@
-libminc2.so.5.2.0 libminc2 #MINVER#
- File_order_dimension_names at Base 5.2.0
- MI2_log_pkg_error2 at Base 5.2.0
- MI2_log_pkg_error3 at Base 5.2.0
- MI2_log_sys_error1 at Base 5.2.0
- MI2_return at Base 5.2.0
- MI2_return_error at Base 5.2.0
- MI2_save_routine_name at Base 5.2.0
- MI2attcopy at Base 5.2.0
- MI2attdel at Base 5.2.0
- MI2attget at Base 5.2.0
- MI2attinq at Base 5.2.0
- MI2attname at Base 5.2.0
- MI2attput at Base 5.2.0
- MI2dimdef at Base 5.2.0
- MI2dimid at Base 5.2.0
- MI2diminq at Base 5.2.0
- MI2dimrename at Base 5.2.0
- MI2endef at Base 5.2.0
- MI2inquire at Base 5.2.0
- MI2redef at Base 5.2.0
- MI2setfill at Base 5.2.0
- MI2sync at Base 5.2.0
- MI2typelen at Base 5.2.0
- MI2vardef at Base 5.2.0
- MI2varget at Base 5.2.0
- MI2varid at Base 5.2.0
- MI2varinq at Base 5.2.0
- MI2varname at Base 5.2.0
- MI2varput1 at Base 5.2.0
- MI2varput at Base 5.2.0
- MI2varputg at Base 5.2.0
- MI_convert_type at Base 5.2.0
- MI_get_sign_from_string at Base 5.2.0
- MI_icv_chkid at Base 5.2.0
- MI_log_pkg_error2 at Base 5.2.0
- MI_log_pkg_error3 at Base 5.2.0
- MI_log_sys_error1 at Base 5.2.0
- MI_return at Base 5.2.0
- MI_return_error at Base 5.2.0
- MI_save_routine_name at Base 5.2.0
- MI_var_loop at Base 5.2.0
- MI_varaccess at Base 5.2.0
- ParseArgv at Base 5.2.0
- ParseLong at Base 5.2.0
- XYZ_dimension_names at Base 5.2.0
- abort_if_allowed at Base 5.2.0
- add_minc2_history at Base 5.2.0
- add_minc_history at Base 5.2.0
- add_minimal_minc_attributes at Base 5.2.0
- add_standard_minc_attributes at Base 5.2.0
- advance_input_volume at Base 5.2.0
- alloc1d at Base 5.2.0
- alloc2d at Base 5.2.0
- alloc_memory_1d at Base 5.2.0
- alloc_memory_2d at Base 5.2.0
- alloc_memory_3d at Base 5.2.0
- alloc_memory_4d at Base 5.2.0
- alloc_memory_5d at Base 5.2.0
- alloc_memory_in_bytes at Base 5.2.0
- alloc_multidim_array at Base 5.2.0
- alloc_string at Base 5.2.0
- alloc_volume_data at Base 5.2.0
- blank_string at Base 5.2.0
- cache_volume_range_has_changed at Base 5.2.0
- cached_volume_has_been_modified at Base 5.2.0
- cancel_volume_input at Base 5.2.0
- check_clobber_file at Base 5.2.0
- check_clobber_file_default_suffix at Base 5.2.0
- cleanup_backup_file at Base 5.2.0
- close_file at Base 5.2.0
- close_minc2_input at Base 5.2.0
- close_minc2_output at Base 5.2.0
- close_minc_input at Base 5.2.0
- close_minc_output at Base 5.2.0
- close_to_identity at Base 5.2.0
- compute_transform_inverse at Base 5.2.0
- compute_world_transform at Base 5.2.0
- concat_char_to_string at Base 5.2.0
- concat_general_transforms at Base 5.2.0
- concat_strings at Base 5.2.0
- concat_to_string at Base 5.2.0
- concat_transforms at Base 5.2.0
- convert_3D_voxel_to_world at Base 5.2.0
- convert_3D_world_to_voxel at Base 5.2.0
- convert_dim_name_to_spatial_axis at Base 5.2.0
- convert_transform_to_starts_and_steps at Base 5.2.0
- convert_value_to_voxel at Base 5.2.0
- convert_values_to_voxels at Base 5.2.0
- convert_voxel_normal_vector_to_world at Base 5.2.0
- convert_voxel_to_value at Base 5.2.0
- convert_voxel_to_world at Base 5.2.0
- convert_voxel_vector_to_world at Base 5.2.0
- convert_voxels_to_values at Base 5.2.0
- convert_world_to_voxel at Base 5.2.0
- convert_world_vector_to_voxel at Base 5.2.0
- copy_auxiliary_data_from_minc2_file at Base 5.2.0
- copy_auxiliary_data_from_minc_file at Base 5.2.0
- copy_auxiliary_data_from_open_minc2_file at Base 5.2.0
- copy_auxiliary_data_from_open_minc_file at Base 5.2.0
- copy_file at Base 5.2.0
- copy_general_transform at Base 5.2.0
- copy_minc_output_options at Base 5.2.0
- copy_multidim_data_reordered at Base 5.2.0
- copy_multidim_reordered at Base 5.2.0
- copy_volume at Base 5.2.0
- copy_volume_auxiliary_and_history at Base 5.2.0
- copy_volume_definition at Base 5.2.0
- copy_volume_definition_no_alloc at Base 5.2.0
- copy_volume_new_type at Base 5.2.0
- create_dataset at Base 5.2.0
- create_empty_multidim_array at Base 5.2.0
- create_grid_transform at Base 5.2.0
- create_grid_transform_no_copy at Base 5.2.0
- create_inverse_general_transform at Base 5.2.0
- create_linear_transform at Base 5.2.0
- create_loop_options at Base 5.2.0
- create_multidim_array at Base 5.2.0
- create_orthogonal_vector at Base 5.2.0
- create_output_dim_names at Base 5.2.0
- create_standard_dataset at Base 5.2.0
- create_string at Base 5.2.0
- create_thin_plate_transform at Base 5.2.0
- create_thin_plate_transform_real at Base 5.2.0
- create_two_orthogonal_vectors at Base 5.2.0
- create_user_transform at Base 5.2.0
- create_volume at Base 5.2.0
- cubic_interpolate at Base 5.2.0
- current_cpu_seconds at Base 5.2.0
- current_realtime_seconds at Base 5.2.0
- delete_dimension_names at Base 5.2.0
- delete_free_format_input at Base 5.2.0
- delete_general_transform at Base 5.2.0
- delete_minc_output_options at Base 5.2.0
- delete_multidim_array at Base 5.2.0
- delete_string at Base 5.2.0
- delete_volume at Base 5.2.0
- delete_volume_cache at Base 5.2.0
- delete_volume_input at Base 5.2.0
- equal_strings at Base 5.2.0
- evaluate_bivariate_interpolating_spline at Base 5.2.0
- evaluate_interpolating_spline at Base 5.2.0
- evaluate_thin_plate_spline at Base 5.2.0
- evaluate_trivariate_interpolating_spline at Base 5.2.0
- evaluate_univariate_interpolating_spline at Base 5.2.0
- evaluate_volume at Base 5.2.0
- evaluate_volume_in_world at Base 5.2.0
- expand_filename at Base 5.2.0
- extract_directory at Base 5.2.0
- file_directory_exists at Base 5.2.0
- file_exists at Base 5.2.0
- file_exists_as_compressed at Base 5.2.0
- filename_extension_matches at Base 5.2.0
- find_character at Base 5.2.0
- flush_file at Base 5.2.0
- flush_volume_cache at Base 5.2.0
- format_time at Base 5.2.0
- free2d at Base 5.2.0
- free_loop_options at Base 5.2.0
- free_memory_1d at Base 5.2.0
- free_memory_2d at Base 5.2.0
- free_memory_3d at Base 5.2.0
- free_memory_4d at Base 5.2.0
- free_memory_5d at Base 5.2.0
- free_tag_points at Base 5.2.0
- free_volume_data at Base 5.2.0
- general_inverse_transform_point at Base 5.2.0
- general_inverse_transform_point_with_input_steps at Base 5.2.0
- general_transform_point at Base 5.2.0
- general_transform_point_with_input_steps at Base 5.2.0
- get_Colour_a at Base 5.2.0
- get_Colour_a_0_1 at Base 5.2.0
- get_Colour_b at Base 5.2.0
- get_Colour_b_0_1 at Base 5.2.0
- get_Colour_g at Base 5.2.0
- get_Colour_g_0_1 at Base 5.2.0
- get_Colour_r at Base 5.2.0
- get_Colour_r_0_1 at Base 5.2.0
- get_absolute_filename at Base 5.2.0
- get_cached_volume_voxel at Base 5.2.0
- get_clock_time at Base 5.2.0
- get_cubic_spline_coefs at Base 5.2.0
- get_date at Base 5.2.0
- get_default_dim_names at Base 5.2.0
- get_default_max_bytes_in_cache at Base 5.2.0
- get_default_tag_file_suffix at Base 5.2.0
- get_default_transform_file_suffix at Base 5.2.0
- get_file_dimension_names at Base 5.2.0
- get_info_current_file at Base 5.2.0
- get_info_current_index at Base 5.2.0
- get_info_current_mincid at Base 5.2.0
- get_info_shape at Base 5.2.0
- get_info_voxel_index at Base 5.2.0
- get_info_whole_file at Base 5.2.0
- get_inverse_linear_transform_ptr at Base 5.2.0
- get_linear_spline_coefs at Base 5.2.0
- get_linear_transform_ptr at Base 5.2.0
- get_loop_labels at Base 5.2.0
- get_lower_case at Base 5.2.0
- get_minc2_file_n_dimensions at Base 5.2.0
- get_minc_file_id at Base 5.2.0
- get_minc_file_n_dimensions at Base 5.2.0
- get_multidim_data_type at Base 5.2.0
- get_multidim_n_dimensions at Base 5.2.0
- get_multidim_sizes at Base 5.2.0
- get_n_bytes_cache_threshold at Base 5.2.0
- get_n_concated_transforms at Base 5.2.0
- get_n_input_volumes at Base 5.2.0
- get_ncopts at Base 5.2.0
- get_nth_general_transform at Base 5.2.0
- get_quadratic_spline_coefs at Base 5.2.0
- get_temporary_filename at Base 5.2.0
- get_transform_origin at Base 5.2.0
- get_transform_origin_real at Base 5.2.0
- get_transform_type at Base 5.2.0
- get_transform_x_axis at Base 5.2.0
- get_transform_x_axis_real at Base 5.2.0
- get_transform_y_axis at Base 5.2.0
- get_transform_y_axis_real at Base 5.2.0
- get_transform_z_axis at Base 5.2.0
- get_transform_z_axis_real at Base 5.2.0
- get_type_range at Base 5.2.0
- get_type_size at Base 5.2.0
- get_upper_case at Base 5.2.0
- get_volume_data_type at Base 5.2.0
- get_volume_dimension_names at Base 5.2.0
- get_volume_direction_cosine at Base 5.2.0
- get_volume_input_minc_file at Base 5.2.0
- get_volume_irregular_starts at Base 5.2.0
- get_volume_irregular_widths at Base 5.2.0
- get_volume_labels at Base 5.2.0
- get_volume_minc2_data_type at Base 5.2.0
- get_volume_n_dimensions at Base 5.2.0
- get_volume_nc_data_type at Base 5.2.0
- get_volume_real_max at Base 5.2.0
- get_volume_real_min at Base 5.2.0
- get_volume_real_range at Base 5.2.0
- get_volume_real_value at Base 5.2.0
- get_volume_separations at Base 5.2.0
- get_volume_sizes at Base 5.2.0
- get_volume_space_type at Base 5.2.0
- get_volume_starts at Base 5.2.0
- get_volume_total_n_voxels at Base 5.2.0
- get_volume_translation at Base 5.2.0
- get_volume_value_hyperslab at Base 5.2.0
- get_volume_value_hyperslab_1d at Base 5.2.0
- get_volume_value_hyperslab_2d at Base 5.2.0
- get_volume_value_hyperslab_3d at Base 5.2.0
- get_volume_value_hyperslab_4d at Base 5.2.0
- get_volume_value_hyperslab_5d at Base 5.2.0
- get_volume_voxel_hyperslab at Base 5.2.0
- get_volume_voxel_hyperslab_1d at Base 5.2.0
- get_volume_voxel_hyperslab_2d at Base 5.2.0
- get_volume_voxel_hyperslab_3d at Base 5.2.0
- get_volume_voxel_hyperslab_4d at Base 5.2.0
- get_volume_voxel_hyperslab_5d at Base 5.2.0
- get_volume_voxel_max at Base 5.2.0
- get_volume_voxel_min at Base 5.2.0
- get_volume_voxel_range at Base 5.2.0
- get_volume_voxel_value at Base 5.2.0
- get_voxel_to_world_transform at Base 5.2.0
- get_voxel_values_1d at Base 5.2.0
- get_voxel_values_2d at Base 5.2.0
- get_voxel_values_3d at Base 5.2.0
- get_voxel_values_4d at Base 5.2.0
- get_voxel_values_5d at Base 5.2.0
- grid_inverse_transform_point at Base 5.2.0
- grid_inverse_transform_point_with_input_steps at Base 5.2.0
- grid_transform_point at Base 5.2.0
- handle_internal_error at Base 5.2.0
- hdf_access at Base 5.2.0
- hdf_attdel at Base 5.2.0
- hdf_attget at Base 5.2.0
- hdf_attinq at Base 5.2.0
- hdf_attname at Base 5.2.0
- hdf_attput at Base 5.2.0
- hdf_close at Base 5.2.0
- hdf_copy_attr at Base 5.2.0
- hdf_create at Base 5.2.0
- hdf_dimdef at Base 5.2.0
- hdf_dimid at Base 5.2.0
- hdf_diminq at Base 5.2.0
- hdf_dimrename at Base 5.2.0
- hdf_enddef at Base 5.2.0
- hdf_flush at Base 5.2.0
- hdf_inquire at Base 5.2.0
- hdf_open at Base 5.2.0
- hdf_var_declare at Base 5.2.0
- hdf_vardef at Base 5.2.0
- hdf_varget at Base 5.2.0
- hdf_vargetg at Base 5.2.0
- hdf_varid at Base 5.2.0
- hdf_varinq at Base 5.2.0
- hdf_varname at Base 5.2.0
- hdf_varput1 at Base 5.2.0
- hdf_varput at Base 5.2.0
- hdf_varputg at Base 5.2.0
- hdf_varsize at Base 5.2.0
- initialize_free_format_input at Base 5.2.0
- initialize_minc2_input at Base 5.2.0
- initialize_minc2_output at Base 5.2.0
- initialize_minc_input at Base 5.2.0
- initialize_minc_input_from_minc_id at Base 5.2.0
- initialize_minc_output at Base 5.2.0
- initialize_progress_report at Base 5.2.0
- initialize_tag_file_input at Base 5.2.0
- initialize_tag_file_output at Base 5.2.0
- initialize_volume_cache at Base 5.2.0
- input_binary_data at Base 5.2.0
- input_boolean at Base 5.2.0
- input_character at Base 5.2.0
- input_double at Base 5.2.0
- input_float at Base 5.2.0
- input_int at Base 5.2.0
- input_line at Base 5.2.0
- input_minc_hyperslab at Base 5.2.0
- input_more_free_format_file at Base 5.2.0
- input_more_minc2_file at Base 5.2.0
- input_more_minc_file at Base 5.2.0
- input_more_of_volume at Base 5.2.0
- input_newline at Base 5.2.0
- input_nonwhite_character at Base 5.2.0
- input_one_tag at Base 5.2.0
- input_possibly_quoted_string at Base 5.2.0
- input_quoted_string at Base 5.2.0
- input_real at Base 5.2.0
- input_short at Base 5.2.0
- input_string at Base 5.2.0
- input_tag_file at Base 5.2.0
- input_tag_points at Base 5.2.0
- input_transform at Base 5.2.0
- input_transform_file at Base 5.2.0
- input_unsigned_short at Base 5.2.0
- input_volume at Base 5.2.0
- invert_general_transform at Base 5.2.0
- invert_square_matrix at Base 5.2.0
- io_binary_data at Base 5.2.0
- io_boolean at Base 5.2.0
- io_double at Base 5.2.0
- io_float at Base 5.2.0
- io_int at Base 5.2.0
- io_ints at Base 5.2.0
- io_newline at Base 5.2.0
- io_quoted_string at Base 5.2.0
- io_real at Base 5.2.0
- io_short at Base 5.2.0
- io_unsigned_char at Base 5.2.0
- io_unsigned_chars at Base 5.2.0
- io_unsigned_short at Base 5.2.0
- is_an_rgb_volume at Base 5.2.0
- is_lower_case at Base 5.2.0
- is_upper_case at Base 5.2.0
- is_volume_dimension_irregular at Base 5.2.0
- make_Colour at Base 5.2.0
- make_Colour_0_1 at Base 5.2.0
- make_backup_file at Base 5.2.0
- make_change_from_bases_transform at Base 5.2.0
- make_change_to_bases_transform at Base 5.2.0
- make_identity_transform at Base 5.2.0
- make_rgba_Colour at Base 5.2.0
- make_rgba_Colour_0_1 at Base 5.2.0
- make_string_upper_case at Base 5.2.0
- mi2log_init at Base 5.2.0
- mi2log_message at Base 5.2.0
- mi2log_set_verbosity at Base 5.2.0
- miadd_child at Base 5.2.0
- miadd_history_attr at Base 5.2.0
- miappend_history at Base 5.2.0
- miattget1 at Base 5.2.0
- miattget at Base 5.2.0
- miattget_pointer at Base 5.2.0
- miattget_with_sign at Base 5.2.0
- miattgetstr at Base 5.2.0
- miattput_pointer at Base 5.2.0
- miattputdbl at Base 5.2.0
- miattputint at Base 5.2.0
- miattputstr at Base 5.2.0
- miclose at Base 5.2.0
- miclose_volume at Base 5.2.0
- miconvert_real_to_voxel at Base 5.2.0
- miconvert_spatial_frequency_origin_to_start at Base 5.2.0
- miconvert_voxel_to_real at Base 5.2.0
- miconvert_voxel_to_world at Base 5.2.0
- miconvert_world_origin_to_start at Base 5.2.0
- miconvert_world_to_voxel at Base 5.2.0
- micopy_all_atts at Base 5.2.0
- micopy_all_var_defs at Base 5.2.0
- micopy_all_var_values at Base 5.2.0
- micopy_attr at Base 5.2.0
- micopy_dimension at Base 5.2.0
- micopy_var_def at Base 5.2.0
- micopy_var_values at Base 5.2.0
- micreate at Base 5.2.0
- micreate_dimension at Base 5.2.0
- micreate_group at Base 5.2.0
- micreate_group_variable at Base 5.2.0
- micreate_ident at Base 5.2.0
- micreate_std_variable at Base 5.2.0
- micreate_tempfile at Base 5.2.0
- micreate_volume at Base 5.2.0
- micreate_volume_image at Base 5.2.0
- micreatex at Base 5.2.0
- midefine_label at Base 5.2.0
- midelete_attr at Base 5.2.0
- midelete_group at Base 5.2.0
- midescend_path at Base 5.2.0
- miexpand_file at Base 5.2.0
- miflush_from_resolution at Base 5.2.0
- mifree_dimension_handle at Base 5.2.0
- mifree_name at Base 5.2.0
- mifree_names at Base 5.2.0
- mifree_volume_props at Base 5.2.0
- miget_attr_length at Base 5.2.0
- miget_attr_type at Base 5.2.0
- miget_attr_values at Base 5.2.0
- miget_attribute at Base 5.2.0
- miget_cfg_bool at Base 5.2.0
- miget_cfg_double at Base 5.2.0
- miget_cfg_int at Base 5.2.0
- miget_cfg_present at Base 5.2.0
- miget_cfg_str at Base 5.2.0
- miget_data_class at Base 5.2.0
- miget_data_type at Base 5.2.0
- miget_data_type_size at Base 5.2.0
- miget_datatype at Base 5.2.0
- miget_default_range at Base 5.2.0
- miget_dimension_apparent_voxel_order at Base 5.2.0
- miget_dimension_class at Base 5.2.0
- miget_dimension_cosines at Base 5.2.0
- miget_dimension_description at Base 5.2.0
- miget_dimension_name at Base 5.2.0
- miget_dimension_offsets at Base 5.2.0
- miget_dimension_sampling_flag at Base 5.2.0
- miget_dimension_separation at Base 5.2.0
- miget_dimension_separations at Base 5.2.0
- miget_dimension_size at Base 5.2.0
- miget_dimension_sizes at Base 5.2.0
- miget_dimension_start at Base 5.2.0
- miget_dimension_starts at Base 5.2.0
- miget_dimension_units at Base 5.2.0
- miget_dimension_width at Base 5.2.0
- miget_dimension_widths at Base 5.2.0
- miget_hyperslab_normalized at Base 5.2.0
- miget_hyperslab_size at Base 5.2.0
- miget_hyperslab_size_hdf at Base 5.2.0
- miget_hyperslab_with_icv at Base 5.2.0
- miget_image_range at Base 5.2.0
- miget_label_name at Base 5.2.0
- miget_label_value at Base 5.2.0
- miget_label_value_by_index at Base 5.2.0
- miget_number_of_defined_labels at Base 5.2.0
- miget_props_blocking at Base 5.2.0
- miget_props_checksum at Base 5.2.0
- miget_props_compression_type at Base 5.2.0
- miget_props_multi_resolution at Base 5.2.0
- miget_props_zlib_compression at Base 5.2.0
- miget_real_value at Base 5.2.0
- miget_real_value_hyperslab at Base 5.2.0
- miget_record_field_name at Base 5.2.0
- miget_record_length at Base 5.2.0
- miget_record_name at Base 5.2.0
- miget_scalar at Base 5.2.0
- miget_slice_dimension_count at Base 5.2.0
- miget_slice_max at Base 5.2.0
- miget_slice_min at Base 5.2.0
- miget_slice_range at Base 5.2.0
- miget_slice_scaling_flag at Base 5.2.0
- miget_space_name at Base 5.2.0
- miget_valid_range at Base 5.2.0
- miget_version at Base 5.2.0
- miget_volume_dimension_count at Base 5.2.0
- miget_volume_dimensions at Base 5.2.0
- miget_volume_from_dimension at Base 5.2.0
- miget_volume_max at Base 5.2.0
- miget_volume_min at Base 5.2.0
- miget_volume_props at Base 5.2.0
- miget_volume_range at Base 5.2.0
- miget_volume_real_range at Base 5.2.0
- miget_volume_valid_max at Base 5.2.0
- miget_volume_valid_min at Base 5.2.0
- miget_volume_valid_range at Base 5.2.0
- miget_volume_voxel_count at Base 5.2.0
- miget_voxel_to_world at Base 5.2.0
- miget_voxel_value at Base 5.2.0
- miget_voxel_value_hyperslab at Base 5.2.0
- miicv_attach at Base 5.2.0
- miicv_create at Base 5.2.0
- miicv_detach at Base 5.2.0
- miicv_free at Base 5.2.0
- miicv_get at Base 5.2.0
- miicv_inqdbl at Base 5.2.0
- miicv_inqint at Base 5.2.0
- miicv_inqlong at Base 5.2.0
- miicv_inqstr at Base 5.2.0
- miicv_ndattach at Base 5.2.0
- miicv_put at Base 5.2.0
- miicv_setdbl at Base 5.2.0
- miicv_setint at Base 5.2.0
- miicv_setlong at Base 5.2.0
- miicv_setstr at Base 5.2.0
- miinit at Base 5.2.0
- miinit_default_range at Base 5.2.0
- miinit_enum at Base 5.2.0
- miinvert_transform at Base 5.2.0
- milist_attr_next at Base 5.2.0
- milist_finish at Base 5.2.0
- milist_grp_next at Base 5.2.0
- milist_start at Base 5.2.0
- milog_init at Base 5.2.0
- milog_message at Base 5.2.0
- milog_set_verbosity at Base 5.2.0
- minc2_type_to_vio_type at Base 5.2.0
- minc_create_thumbnail at Base 5.2.0
- minc_file_size at Base 5.2.0
- minc_format_convert at Base 5.2.0
- minc_free_info at Base 5.2.0
- minc_get_world_transform at Base 5.2.0
- minc_load_data at Base 5.2.0
- minc_save_data at Base 5.2.0
- minc_save_done at Base 5.2.0
- minc_save_start at Base 5.2.0
- minc_transform_to_world at Base 5.2.0
- minc_update_thumbnail at Base 5.2.0
- minc_update_thumbnails at Base 5.2.0
- minew_volume_props at Base 5.2.0
- minormalize_vector at Base 5.2.0
- miopen at Base 5.2.0
- miopen_volume at Base 5.2.0
- misave_valid_range at Base 5.2.0
- miselect_resolution at Base 5.2.0
- miset_apparent_dimension_order at Base 5.2.0
- miset_apparent_dimension_order_by_name at Base 5.2.0
- miset_apparent_record_dimension_flag at Base 5.2.0
- miset_attr_at_loc at Base 5.2.0
- miset_attr_values at Base 5.2.0
- miset_attribute at Base 5.2.0
- miset_coords at Base 5.2.0
- miset_dimension_apparent_voxel_order at Base 5.2.0
- miset_dimension_class at Base 5.2.0
- miset_dimension_cosines at Base 5.2.0
- miset_dimension_description at Base 5.2.0
- miset_dimension_name at Base 5.2.0
- miset_dimension_offsets at Base 5.2.0
- miset_dimension_sampling_flag at Base 5.2.0
- miset_dimension_separation at Base 5.2.0
- miset_dimension_separations at Base 5.2.0
- miset_dimension_size at Base 5.2.0
- miset_dimension_start at Base 5.2.0
- miset_dimension_starts at Base 5.2.0
- miset_dimension_units at Base 5.2.0
- miset_dimension_width at Base 5.2.0
- miset_dimension_widths at Base 5.2.0
- miset_hyperslab_normalized at Base 5.2.0
- miset_hyperslab_with_icv at Base 5.2.0
- miset_props_blocking at Base 5.2.0
- miset_props_checksum at Base 5.2.0
- miset_props_compression_type at Base 5.2.0
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- miset_props_record at Base 5.2.0
- miset_props_template at Base 5.2.0
- miset_props_zlib_compression at Base 5.2.0
- miset_real_value at Base 5.2.0
- miset_real_value_hyperslab at Base 5.2.0
- miset_record_field_name at Base 5.2.0
- miset_slice_max at Base 5.2.0
- miset_slice_min at Base 5.2.0
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- miset_space_name at Base 5.2.0
- miset_spatial_frequency_origin at Base 5.2.0
- miset_valid_range at Base 5.2.0
- miset_volume_max at Base 5.2.0
- miset_volume_min at Base 5.2.0
- miset_volume_range at Base 5.2.0
- miset_volume_valid_max at Base 5.2.0
- miset_volume_valid_min at Base 5.2.0
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- miset_voxel_value at Base 5.2.0
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- miset_world_origin at Base 5.2.0
- mitransform_coord at Base 5.2.0
- mitranslate_coords at Base 5.2.0
- mitranslate_hyperslab_origin at Base 5.2.0
- mitype_len at Base 5.2.0
- mitype_sign at Base 5.2.0
- mitype_to_hdftype at Base 5.2.0
- mivar_exists at Base 5.2.0
- mivarget1 at Base 5.2.0
- mivarget at Base 5.2.0
- mivarput1 at Base 5.2.0
- mivarput at Base 5.2.0
- mni_get_nonwhite_character at Base 5.2.0
- mni_input_int at Base 5.2.0
- mni_input_keyword_and_equal_sign at Base 5.2.0
- mni_input_line at Base 5.2.0
- mni_input_real at Base 5.2.0
- mni_input_reals at Base 5.2.0
- mni_input_string at Base 5.2.0
- mni_skip_expected_character at Base 5.2.0
- move_file at Base 5.2.0
- multidim_array_is_alloced at Base 5.2.0
- nc_type_to_minc2_type at Base 5.2.0
- nd_begin_looping at Base 5.2.0
- nd_end_of_loop at Base 5.2.0
- nd_increment_loop at Base 5.2.0
- nd_update_current_count at Base 5.2.0
- newton_root_find at Base 5.2.0
- nonspatial_voxel_to_world at Base 5.2.0
- nonspatial_world_to_voxel at Base 5.2.0
- open_cache_volume_input_file at Base 5.2.0
- open_file at Base 5.2.0
- open_file_with_default_suffix at Base 5.2.0
- output_binary_data at Base 5.2.0
- output_boolean at Base 5.2.0
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- output_comments at Base 5.2.0
- output_double at Base 5.2.0
- output_float at Base 5.2.0
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- output_minc2_volume at Base 5.2.0
- output_minc_hyperslab at Base 5.2.0
- output_minc_volume at Base 5.2.0
- output_modified_volume at Base 5.2.0
- output_newline at Base 5.2.0
- output_one_tag at Base 5.2.0
- output_quoted_string at Base 5.2.0
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- output_short at Base 5.2.0
- output_string at Base 5.2.0
- output_tag_file at Base 5.2.0
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- output_transform at Base 5.2.0
- output_transform_file at Base 5.2.0
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- output_volume_to_minc_file_position at Base 5.2.0
- pop_ncopts at Base 5.2.0
- pop_print_error_function at Base 5.2.0
- pop_print_function at Base 5.2.0
- print at Base 5.2.0
- print_alloc_source_line at Base 5.2.0
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- print_time at Base 5.2.0
- push_ncopts at Base 5.2.0
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- push_print_function at Base 5.2.0
- read_file_names at Base 5.2.0
- real_is_double at Base 5.2.0
- realloc_memory at Base 5.2.0
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- remove_file at Base 5.2.0
- reorder_voxel_to_xyz at Base 5.2.0
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- replace_string at Base 5.2.0
- reset_input_volume at Base 5.2.0
- restructure_array at Base 5.2.0
- scaled_maximal_pivoting_gaussian_elimination at Base 5.2.0
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- set_file_position at Base 5.2.0
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- string_ends_in at Base 5.2.0
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-libminc_io.so.5.2.0 libminc2 #MINVER#
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- _ZNK4minc11minc_1_base8att_nameB5cxx11EPKci at Base 5.2.0
- _ZNK4minc11minc_1_base8att_nameB5cxx11Eii at Base 5.2.0
- _ZNK4minc11minc_1_base8att_typeEPKcS2_ at Base 5.2.0
- _ZNK4minc11minc_1_base8att_typeEiPKc at Base 5.2.0
- _ZNK4minc11minc_1_base8var_nameB5cxx11Ei at Base 5.2.0
- _ZNKSt5ctypeIcE8do_widenEc at Base 5.2.0
- _ZNSt12_Vector_baseIdSaIdEED1Ev at Base 5.2.0
- _ZNSt12_Vector_baseIdSaIdEED2Ev at Base 5.2.0
- _ZNSt12_Vector_baseIiSaIiEED1Ev at Base 5.2.0
- _ZNSt12_Vector_baseIiSaIiEED2Ev at Base 5.2.0
- _ZNSt12_Vector_baseIlSaIlEED1Ev at Base 5.2.0
- _ZNSt12_Vector_baseIlSaIlEED2Ev at Base 5.2.0
- _ZNSt6vectorIN4minc8dim_infoESaIS1_EE17_M_default_appendEm at Base 5.2.0
- _ZNSt6vectorIdSaIdEE14_M_fill_insertEN9__gnu_cxx17__normal_iteratorIPdS1_EEmRKd at Base 5.2.0
- _ZNSt6vectorIiSaIiEE14_M_fill_insertEN9__gnu_cxx17__normal_iteratorIPiS1_EEmRKi at Base 5.2.0
- _ZTIN4minc11minc_1_baseE at Base 5.2.0
- _ZTIN4minc13generic_errorE at Base 5.2.0
- _ZTIN4minc13minc_1_readerE at Base 5.2.0
- _ZTIN4minc13minc_1_writerE at Base 5.2.0
- _ZTSN4minc11minc_1_baseE at Base 5.2.0
- _ZTSN4minc13generic_errorE at Base 5.2.0
- _ZTSN4minc13minc_1_readerE at Base 5.2.0
- _ZTSN4minc13minc_1_writerE at Base 5.2.0
- _ZTVN4minc11minc_1_baseE at Base 5.2.0
- _ZTVN4minc13minc_1_readerE at Base 5.2.0
- _ZTVN4minc13minc_1_writerE at Base 5.2.0


=====================================
debian/patches/0001-build-using-system-find-dot-cmake.patch deleted
=====================================
@@ -1,27 +0,0 @@
-From: Steve Robbins <smr at debian.org>
-Date: Thu, 1 Sep 2022 21:00:02 -0500
-Subject: Build using system findpackage.cmake files
-
-Last-Changed: Mon Aug 24 22:36:21 CDT 2015
-Forwarded-Upstream: No
-
-The sources contain an older copy of FindNETCDF.cmake.
-We delete that in debian/rules to use the system-supplied
-version, but also require this patch so that the newer
-variable HDF5_C_LIBRARIES is used.
----
- CMakeLists.txt | 1 +
- 1 file changed, 1 insertion(+)
-
-diff --git a/CMakeLists.txt b/CMakeLists.txt
-index caf681a..63292fe 100644
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -84,6 +84,7 @@ IF(NOT LIBMINC_EXTERNALLY_CONFIGURED)
-   ENDIF()
-   
-   SET(HAVE_ZLIB ON)
-+  set(HDF5_LIBRARY ${HDF5_C_LIBRARIES})
- ELSE(NOT LIBMINC_EXTERNALLY_CONFIGURED)
-   #TODO: set paths for HDF5 etc
- ENDIF(NOT LIBMINC_EXTERNALLY_CONFIGURED)


=====================================
debian/patches/0002-initialize_arrays_in_tests.patch
=====================================
@@ -10,8 +10,10 @@ with zeros.
  testdir/multidim_test.c | 6 +++---
  1 file changed, 3 insertions(+), 3 deletions(-)
 
---- libminc.orig/testdir/multidim_test.c
-+++ libminc/testdir/multidim_test.c
+diff --git a/testdir/multidim_test.c b/testdir/multidim_test.c
+index 74b68be..ae0d674 100644
+--- a/testdir/multidim_test.c
++++ b/testdir/multidim_test.c
 @@ -6,7 +6,7 @@
  static int
  test1(void)
@@ -21,7 +23,7 @@ with zeros.
    int sizes[TEST1_N_DIMENSIONS] = { 1, 1, 1 };
    int read_sizes[VIO_MAX_DIMENSIONS] = { 5, 5, 5, 5, 5 };
    int i;
-@@ -92,7 +92,7 @@
+@@ -92,7 +92,7 @@ test1(void)
  static int
  test2(void)
  {
@@ -30,7 +32,7 @@ with zeros.
    int sizes[TEST2_N_DIMENSIONS] = { 31, 61, 53, 41, 3 };
    int read_sizes[VIO_MAX_DIMENSIONS] = { 5, 5, 5, 5, 5 };
    int value;
-@@ -188,7 +188,7 @@
+@@ -188,7 +188,7 @@ test2(void)
  static int
  test3(VIO_Data_types data_type, int n_dimensions, int sizes[])
  {


=====================================
debian/patches/0003-disable-dimension-test.patch deleted
=====================================
@@ -1,35 +0,0 @@
-From: Gert Wollny <gewo at debian.org>
-Date: Thu, 1 Sep 2022 21:00:02 -0500
-Subject: Disable the minc2 dimension tests, fails on bigendian
-
-Bug: https://github.com/BIC-MNI/libminc/issues/100
-
-This is a temporary measure to get reverese dependencies like ITK
-forward. ITK needs this new version and doesn't run on bigendian 
-anyway.
----
- testdir/CMakeLists.txt | 4 ++--
- 1 file changed, 2 insertions(+), 2 deletions(-)
-
-diff --git a/testdir/CMakeLists.txt b/testdir/CMakeLists.txt
-index 68f7191..45b0820 100644
---- a/testdir/CMakeLists.txt
-+++ b/testdir/CMakeLists.txt
-@@ -160,7 +160,7 @@ ADD_EXECUTABLE(minc2-create-test-images-2 minc2-create-test-images-2.c)
- ADD_EXECUTABLE(minc2-create-test-images minc2-create-test-images.c)
- ADD_EXECUTABLE(minc2-datatype-test minc2-datatype-test.c)
- ADD_EXECUTABLE(minc2-large-attribute minc2-large-attribute.c)
--ADD_EXECUTABLE(minc2-dimension-test minc2-dimension-test.c)
-+#ADD_EXECUTABLE(minc2-dimension-test minc2-dimension-test.c)
- ADD_EXECUTABLE(minc2-full-test minc2-full-test.c)
- ADD_EXECUTABLE(minc2-grpattr-test minc2-grpattr-test.c)
- ADD_EXECUTABLE(minc2-hyper-test-2 minc2-hyper-test-2.c)
-@@ -197,7 +197,7 @@ add_minc_test(minc2-large-attribute-1m    minc2-large-attribute 1000000 ${CMAKE_
- add_minc_test(minc2-datatype-test         minc2-datatype-test  
-                                           ${CMAKE_CURRENT_BINARY_DIR}/datatype_minc2.mnc)
-                                           
--add_minc_test(minc2-dimension-test        minc2-dimension-test)
-+#add_minc_test(minc2-dimension-test        minc2-dimension-test)
- add_minc_test(minc2-full-test             minc2-full-test)
- add_minc_test(minc2-grpattr-test          minc2-grpattr-test)
- add_minc_test(minc2-hyper-test-2          minc2-hyper-test-2)


=====================================
debian/patches/0004-Fix-setting-of-LIBMINC_USE_FILE_CONFIG-to-be-correct.patch
=====================================
@@ -6,9 +6,11 @@ Subject: Fix setting of LIBMINC_USE_FILE_CONFIG to be correct for Debian.
  CMakeLists.txt | 2 +-
  1 file changed, 1 insertion(+), 1 deletion(-)
 
---- libminc.orig/CMakeLists.txt
-+++ libminc/CMakeLists.txt
-@@ -631,7 +631,7 @@
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 6dedf3d..be2c590 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -631,7 +631,7 @@ if(LIBMINC_IS_TOP_LEVEL OR LIBMINC_EXTERNALLY_CONFIGURED)
    export(TARGETS ${LIBMINC_LIBRARY} FILE "${LIBMINC_EXPORTED_TARGETS}.cmake")
  
    # config for install dir


=====================================
debian/patches/0005-Disable-setting-RPATH.patch
=====================================
@@ -3,6 +3,23 @@ Date: Thu, 1 Sep 2022 22:34:53 -0500
 Subject: Disable setting RPATH.
 
 ---
- CMakeLists.txt | 1 -
- 1 file changed, 1 deletion(-)
+ CMakeLists.txt | 6 ------
+ 1 file changed, 6 deletions(-)
 
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index be2c590..d4fb033 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -564,12 +564,6 @@ set_target_properties(${LIBMINC_LIBRARY}
+   POSITION_INDEPENDENT_CODE ON
+ )
+ 
+-# Scope INSTALL_RPATH to the target instead of global CMAKE_INSTALL_RPATH
+-set_target_properties(${LIBMINC_LIBRARY}
+- PROPERTIES
+-  INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/${CMAKE_INSTALL_LIBDIR}"
+-)
+-
+ if(LIBMINC_MINC1_SUPPORT)
+   set(LIBMINC_LIBRARIES        ${LIBMINC_LIBRARIES} ${NETCDF_LIBRARY} )
+   set(LIBMINC_STATIC_LIBRARIES ${LIBMINC_STATIC_LIBRARIES} ${NETCDF_LIBRARY} )


=====================================
debian/patches/0006-Drop-hdf5-from_LIBMINC_LIBRARIES_CONFIG.patch
=====================================
@@ -1,20 +1,25 @@
-Author: Gilles Filippini <pini at debian.org>
+From: Gilles Filippini <pini at debian.org>
+Date: Sat, 9 May 2026 11:15:00 -0500
+Subject: Support for cmake built HDF5 - Fix insighttoolkit5 FTBFS
+
 Last-Update: Wed, 12 Nov 2025
 Bug-Debian: https://bugs.debian.org/1120574
-Description: Support for cmake built HDF5 - Fix insighttoolkit5 FTBFS
+---
+ CMakeLists.txt | 4 ++--
+ 1 file changed, 2 insertions(+), 2 deletions(-)
 
-Index: libminc-2.4.07/CMakeLists.txt
-===================================================================
---- libminc-2.4.07.orig/CMakeLists.txt
-+++ libminc-2.4.07/CMakeLists.txt
-@@ -425,8 +425,8 @@ ENDIF()
- get_filename_component(HDF5_LIBRARY_NAME "${HDF5_LIBRARY}" NAME)
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index d4fb033..adfc5e9 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -396,8 +396,8 @@ get_filename_component(HDF5_LIBRARY_NAME "${HDF5_LIBRARY}" NAME)
  get_filename_component(ZLIB_LIBRARY_NAME "${ZLIB_LIBRARY}" NAME)
  
--SET(LIBMINC_LIBRARIES        ${LIBMINC_LIBRARY} ${HDF5_LIBRARY} ${NIFTI_LIBRARIES} ${ZLIB_LIBRARY})
--SET(LIBMINC_LIBRARIES_CONFIG ${LIBMINC_LIBRARY} ${HDF5_LIBRARY_NAME} ${NIFTI_LIBRARY_NAME} ${ZNZ_LIBRARY_NAME} ${ZLIB_LIBRARY_NAME})
-+SET(LIBMINC_LIBRARIES        ${LIBMINC_LIBRARY} ${NIFTI_LIBRARIES} ${ZLIB_LIBRARY})
-+SET(LIBMINC_LIBRARIES_CONFIG ${LIBMINC_LIBRARY} ${NIFTI_LIBRARY_NAME} ${ZNZ_LIBRARY_NAME} ${ZLIB_LIBRARY_NAME})
+ # Backward-compat: keep flat library list variables populated
+-set(LIBMINC_LIBRARIES        ${LIBMINC_LIBRARY} ${HDF5_LIBRARY} ${NIFTI_LIBRARIES} ${ZLIB_LIBRARY})
+-set(LIBMINC_LIBRARIES_CONFIG ${LIBMINC_LIBRARY} ${HDF5_LIBRARY_NAME} ${NIFTI_LIBRARY_NAME} ${ZNZ_LIBRARY_NAME} ${ZLIB_LIBRARY_NAME})
++set(LIBMINC_LIBRARIES        ${LIBMINC_LIBRARY} ${NIFTI_LIBRARIES} ${ZLIB_LIBRARY})
++set(LIBMINC_LIBRARIES_CONFIG ${LIBMINC_LIBRARY} ${NIFTI_LIBRARY_NAME} ${ZNZ_LIBRARY_NAME} ${ZLIB_LIBRARY_NAME})
  message("LIBMINC_LIBRARIES_CONFIG=${LIBMINC_LIBRARIES_CONFIG}")
  
- SET(LIBMINC_STATIC_LIBRARIES ${LIBMINC_LIBRARY_STATIC} ${HDF5_LIBRARY} ${NIFTI_LIBRARIES} ${ZLIB_LIBRARY})
+ set(LIBMINC_STATIC_LIBRARIES ${LIBMINC_LIBRARY_STATIC} ${HDF5_LIBRARY} ${NIFTI_LIBRARIES} ${ZLIB_LIBRARY})


=====================================
debian/patches/0007-Install-cmake-in-LIBMINC
=====================================
@@ -0,0 +1,47 @@
+From: Steve Robbins <smr at debian.org>
+Date: Sat, 9 May 2026 11:15:00 -0500
+Subject: Install all cmake files into LIBMINC.
+
+Ensure all the cmake files end up in /usr/.../cmake/LIBMINC.  This fixes a build
+failure for insighttoolkit.
+
+---
+ CMakeLists.txt         | 4 ++--
+ LIBMINCConfig.cmake.in | 2 +-
+ 2 files changed, 3 insertions(+), 3 deletions(-)
+
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index adfc5e9..1d2ea94 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -727,7 +727,7 @@ if(LIBMINC_IS_TOP_LEVEL OR LIBMINC_EXTERNALLY_CONFIGURED)
+     install(
+       EXPORT ${LIBMINC_EXPORTED_TARGETS}
+       NAMESPACE LIBMINC::
+-      DESTINATION ${LIBMINC_INSTALL_LIB_DIR}/cmake
++      DESTINATION ${LIBMINC_INSTALL_LIB_DIR}/cmake/LIBMINC
+       COMPONENT Development
+     )
+ 
+@@ -747,7 +747,7 @@ if(LIBMINC_IS_TOP_LEVEL OR LIBMINC_EXTERNALLY_CONFIGURED)
+       FILES
+        ${_LIBMINC_CONFIG_INSTALL_FILES}
+       DESTINATION
+-       ${LIBMINC_INSTALL_LIB_DIR}/cmake
++       ${LIBMINC_INSTALL_LIB_DIR}/cmake/LIBMINC
+       COMPONENT Development)
+   endif()
+ 
+diff --git a/LIBMINCConfig.cmake.in b/LIBMINCConfig.cmake.in
+index 4d144a5..4cae9df 100644
+--- a/LIBMINCConfig.cmake.in
++++ b/LIBMINCConfig.cmake.in
+@@ -21,7 +21,7 @@ cmake_minimum_required(VERSION 3.10)
+ 
+ include(CMakeFindDependencyMacro)
+ 
+-get_filename_component(LIBMINC_INSTALL_PREFIX "${CMAKE_CURRENT_LIST_DIR}/../../" ABSOLUTE)
++get_filename_component(LIBMINC_INSTALL_PREFIX "${CMAKE_CURRENT_LIST_DIR}/../../../../" ABSOLUTE)
+ get_filename_component(LIBMINC_CMAKE_DIR "${CMAKE_CURRENT_LIST_FILE}" PATH)
+ 
+ # ----- Feature flags (substituted at configure time) -----


=====================================
debian/patches/series
=====================================
@@ -1,2 +1,5 @@
 0002-initialize_arrays_in_tests.patch
 0004-Fix-setting-of-LIBMINC_USE_FILE_CONFIG-to-be-correct.patch
+0005-Disable-setting-RPATH.patch
+0006-Drop-hdf5-from_LIBMINC_LIBRARIES_CONFIG.patch
+0007-Install-cmake-in-LIBMINC


=====================================
debian/rules
=====================================
@@ -12,7 +12,6 @@ endif
 ARCH = $(shell dpkg-architecture -qDEB_TARGET_MULTIARCH)
 
 CMAKE_FLAGS = \
-	-DLIB_SUFFIX=/$(ARCH) \
 	-DBUILD_TESTING:BOOL=ON \
 	-DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON \
 	-DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON \



View it on GitLab: https://salsa.debian.org/med-team/libminc/-/compare/7f2d41f0a1e369b7118fcffcbe703d34d1d636d5...6eda6f510bf659e0886bae365fc43e53252989e3

-- 
View it on GitLab: https://salsa.debian.org/med-team/libminc/-/compare/7f2d41f0a1e369b7118fcffcbe703d34d1d636d5...6eda6f510bf659e0886bae365fc43e53252989e3
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