[med-svn] [Git][med-team/vg][master] Added remarks

Andreas Tille (@tille) gitlab at salsa.debian.org
Thu Oct 22 10:47:39 BST 2026



Andreas Tille pushed to branch master at Debian Med / vg


Commits:
07233177 by Andreas Tille at 2026-10-22T11:37:26+02:00
Added remarks

- - - - -


1 changed file:

- debian/deps-to-package.md


Changes:

=====================================
debian/deps-to-package.md
=====================================
@@ -29,18 +29,18 @@ recorded on this date (they move over time; verify before packaging).
 
 ## B. Not in Debian, but a Salsa packaging repo already exists (check before creating new)
 
-| Debian project name | Upstream URL | Existing Salsa repo |
+| Debian project name | Upstream URL | Existing Salsa repo | Remark |
 |---|---|---|
-| libsonlib | https://github.com/benedictpaten/sonLib | med-team/libsonlib |
-| libgbwt | https://github.com/jltsiren/gbwt | med-team/gbwt |
-| libgcsa2 | https://github.com/jltsiren/gcsa2 | med-team/gcsa2 |
+| libsonlib | https://github.com/benedictpaten/sonLib | med-team/libsonlib | In new queue |
+| libgbwt | https://github.com/jltsiren/gbwt | med-team/gbwt | In new queue |
+| libgcsa2 | https://github.com/jltsiren/gcsa2 | med-team/gcsa2 | In new queue |
 
 ## C. Packaged in Debian, but vg uses a fork / newer snapshot (different fix)
 
-| Project | vg's dep (fork/snapshot) | Debian package |
+| Project | vg's dep (fork/snapshot) | Debian package | Remark |
 |---|---|---|
-| libsdsl | vgteam/sdsl-lite fork (newer snapshot; Debian libsdsl-dev is older and "fails many tests") | libsdsl-dev |
-| libssw | vgteam/Complete-Striped-Smith-Waterman-Library fork | libssw-dev (original upstream) |
+| libsdsl | vgteam/sdsl-lite fork (newer snapshot; Debian libsdsl-dev is older and "fails many tests") | libsdsl-dev | Upgraded to version 2.4 |
+| libssw | vgteam/Complete-Striped-Smith-Waterman-Library fork | libssw-dev (original upstream) | What is the difference between the fork? |
 
 Fix for both: package/update to the vg fork rather than bundling.
 



View it on GitLab: https://salsa.debian.org/med-team/vg/-/commit/0723317748d5d25e06a37bbcb53d01914c6bcaaf

-- 
View it on GitLab: https://salsa.debian.org/med-team/vg/-/commit/0723317748d5d25e06a37bbcb53d01914c6bcaaf
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