[med-svn] [Git][med-team/pilon][master] 5 commits: d/watch: Version=5

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / pilon


Commits:
7a26513b by Andreas Tille at 2026-10-26T15:24:57+01:00
d/watch: Version=5

- - - - -
bb016ece by Andreas Tille at 2026-10-26T15:25:12+01:00
Remove redundant Priority: optional from source stanza.

Changes-By: lintian-brush
Fixes: lintian: source: redundant-priority-optional-field
See-also: https://lintian.debian.org/tags/redundant-priority-optional-field.html

- - - - -
0240a024 by Andreas Tille at 2026-10-26T15:25:12+01:00
Update standards version to 4.7.4, no changes needed.

Upgrade checklist verified:
 4.7.0 → 4.7.1:
  * Package does not install to non-/usr paths
 4.7.3 → 4.7.4:
  * Package is not in non-free-firmware

Changes-By: lintian-brush
Fixes: lintian: source: out-of-date-standards-version 4.7.0 (released 2024-04-07) (current is 4.7.4.1)
See-also: https://lintian.debian.org/tags/out-of-date-standards-version.html

- - - - -
b33389bf by Andreas Tille at 2026-10-26T15:25:14+01:00
Set upstream metadata fields: Repository-Browse.

Changes-By: lintian-brush

- - - - -
8e739f3b by Andreas Tille at 2026-10-26T15:26:31+01:00
cme fix dpkg-control

- - - - -


4 changed files:

- debian/changelog
- debian/control
- debian/upstream/metadata
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,13 +1,20 @@
 pilon (1.24-5) UNRELEASED; urgency=medium
 
-  * Team upload.
+  [ Juan Manuel Méndez Rey ]
   * Rebuild against Scala 2.12 (#1142168): Build-Depends on scala (>=
     2.12~), Depends on scala-library (>= 2.12~), and put the scala-
     library-2.12.jar series link on the manifest Class-Path, since jars
     built with one Scala series are not binary compatible with another.
     The existing build_with_scala2_11.patch also covers 2.12.
 
- -- Juan Manuel Méndez Rey <juan.mendezr at proton.me>  Fri, 02 Oct 2026 02:38:24 +0200
+  [ Andreas Tille ]
+  * d/watch: Version=5
+  * Remove redundant Priority: optional from source stanza.
+  * Update standards version to 4.7.4, no changes needed.
+  * Set upstream metadata fields: Repository-Browse.
+  * cme fix dpkg-control
+
+ -- Andreas Tille <tille at debian.org>  Mon, 26 Oct 2026 15:24:31 +0100
 
 pilon (1.24-4) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -1,14 +1,15 @@
 Source: pilon
+Standards-Version: 4.7.4
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Andreas Tille <tille at debian.org>,
-           Pierre Gruet <pgt at debian.org>
+Uploaders:
+ Andreas Tille <tille at debian.org>,
+ Pierre Gruet <pgt at debian.org>,
 Section: science
-Priority: optional
-Build-Depends: debhelper-compat (= 13),
-               javahelper,
-               scala (>= 2.12~),
-               libhtsjdk-java
-Standards-Version: 4.7.0
+Build-Depends:
+ debhelper-compat (= 14),
+ javahelper,
+ libhtsjdk-java,
+ scala (>= 2.12~),
 Vcs-Browser: https://salsa.debian.org/med-team/pilon
 Vcs-Git: https://salsa.debian.org/med-team/pilon.git
 Homepage: https://github.com/broadinstitute/pilon/wiki
@@ -16,14 +17,17 @@ Rules-Requires-Root: no
 
 Package: pilon
 Architecture: all
-Depends: ${misc:Depends},
-         default-jre,
-         java-wrappers,
-         libhtsjdk-java,
-         libcommons-lang-java,
-         scala-library (>= 2.12~)
-Conflicts: pilon-non-free
-Replaces: pilon-non-free
+Depends:
+ default-jre,
+ java-wrappers,
+ libcommons-lang-java,
+ libhtsjdk-java,
+ scala-library (>= 2.12~),
+ ${misc:Depends},
+Conflicts:
+ pilon-non-free,
+Replaces:
+ pilon-non-free,
 Description: automated genome assembly improvement and variant detection tool
  Pilon is a software tool which can be used to:
   * Automatically improve draft assemblies


=====================================
debian/upstream/metadata
=====================================
@@ -29,3 +29,5 @@ Registry:
     Entry: pilon
 Repository: https://github.com/broadinstitute/pilon.git
 Repository-Browse: https://github.com/broadinstitute/pilon
+
+Repository-Browse: https://github.com/broadinstitute/pilon


=====================================
debian/watch
=====================================
@@ -1,4 +1,6 @@
-version=4
+Version: 5
 
-opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \
-  https://github.com/broadinstitute/pilon/tags .*/v?(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
+Template: Github
+Dist: https://github.com/broadinstitute/pilon
+Dversionmangle: auto
+Repacksuffix: +dfsg



View it on GitLab: https://salsa.debian.org/med-team/pilon/-/compare/ea402c16bb5b401ef995510e5e7d6a741d2e96b6...8e739f3bcaa642630e3ab3f5224b459675812b67

-- 
View it on GitLab: https://salsa.debian.org/med-team/pilon/-/compare/ea402c16bb5b401ef995510e5e7d6a741d2e96b6...8e739f3bcaa642630e3ab3f5224b459675812b67
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