[med-svn] [Git][med-team/python-pybedtools][master] 11 commits: d/watch:

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / python-pybedtools


Commits:
5f334592 by Andreas Tille at 2026-09-24T11:18:31+02:00
d/watch:

   - Version=5
   - Use tags

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8df1284f by Andreas Tille at 2026-09-24T11:18:46+02:00
New upstream version

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c3fcf37a by Andreas Tille at 2026-09-24T11:18:47+02:00
New upstream version 0.12.1
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73301d40 by Andreas Tille at 2026-09-24T11:19:18+02:00
Update upstream source from tag 'upstream/0.12.1'

Update to upstream version '0.12.1'
with Debian dir 7498b7d1a1f765a5053b84f22b2390da74b83c12
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787eb38a by Andreas Tille at 2026-09-24T11:19:18+02:00
Standards-Version: 4.7.4 (routine-update)

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7b401389 by Andreas Tille at 2026-09-24T11:21:49+02:00
Changes made by cme

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1ff1c525 by Andreas Tille at 2026-09-24T10:21:58+01:00
Reformat the Last-Update date as ISO YYYY-MM-DD.

Changes-By: lintian-brush
Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/add_missing_shebang.patch]
See-also: https://lintian.debian.org/tags/invalid-dep3-format-patch-wrong-last-update.html

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a73ba13d by Andreas Tille at 2026-09-24T10:22:00+01:00
Use dh-sequence-* build dependencies instead of dh --with: sphinxdoc.

Changes-By: lintian-brush

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4164ef74 by Andreas Tille at 2026-09-24T11:24:32+02:00
Rebase (and remove) patches

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1b4ebc62 by Andreas Tille at 2026-09-24T11:29:53+02:00
d/copyright: pybedtools/include have changed license to MIT; Add lrc.config

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a3e14114 by Andreas Tille at 2026-09-24T11:34:07+02:00
New upstream version closes bug

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45 changed files:

- .github/workflows/main.yml
- README.rst
- + RELEASE.md
- debian/changelog
- debian/control
- debian/copyright
- + debian/lrc.config
- − debian/patches/416.patch
- debian/patches/add_missing_shebang.patch
- − debian/patches/fix-doctest-imports.py
- − debian/patches/remove_badges_from_documentation.patch
- debian/patches/series
- − debian/patches/test-tempdir
- debian/patches/yaml_safe_load.patch
- debian/rules
- debian/watch
- docs/README.rst
- docs/source/autodocs/pybedtools.contrib.plotting.Track.rst
- docs/source/changes.rst
- docs/source/pybedtools.featurefuncs.add_color.rst
- docs/source/pybedtools.featurefuncs.bedgraph_scale.rst
- docs/source/pybedtools.featurefuncs.extend_fields.rst
- docs/source/pybedtools.featurefuncs.five_prime.rst
- docs/source/pybedtools.featurefuncs.greater_than.rst
- docs/source/pybedtools.featurefuncs.less_than.rst
- docs/source/pybedtools.featurefuncs.normalized_to_length.rst
- docs/source/pybedtools.featurefuncs.three_prime.rst
- pybedtools/__init__.py
- pybedtools/bedtool.py
- pybedtools/cbedtools.pxd
- pybedtools/contrib/long_range_interaction.py
- pybedtools/featurefuncs.pyx
- pybedtools/test/test_1.py
- pybedtools/test/test_cbedtools.py
- pybedtools/test/test_contrib.py
- pybedtools/test/test_gzip_support.py
- pybedtools/test/test_helpers.py
- pybedtools/test/test_issues.py
- pybedtools/test/test_iter.py
- pybedtools/test/test_pathlib.py
- pybedtools/test/tfuncs.py
- pybedtools/version.py
- pyproject.toml
- setup.cfg
- setup.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-pybedtools/-/compare/61e6cb615ce3d7d34ea85549d99b8010114c11a7...a3e14114630f7a3f2998baf859ded3cfc836966f

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-pybedtools/-/compare/61e6cb615ce3d7d34ea85549d99b8010114c11a7...a3e14114630f7a3f2998baf859ded3cfc836966f
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