[Debian-med-packaging] Bug#697344: error: abyss has been compiled to use the POPCNT

Ognyan Kulev ogi at tower.3.bg
Fri Jan 4 08:41:27 UTC 2013


Package: abyss
Version: 1.3.4-2
Severity: grave

Trying to run abyss on Xeon E7340 leads to this error immediately after
reading the fastq file:

error: abyss has been compiled to use the POPCNT
instruction, which this machine lacks. Recompile using
configure --disable-popcnt to disable this feature.

POPCNT instruction appeared along with SSE4.2.

Please configure abyss Debian package to work on all i686 processors by
using --disable-popcnt.

Regards,
Ognyan Kulev



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