[Debian-med-packaging] Bug#744996: ITP: varscan -- variant detection in next-generation sequencing data

Andreas Tille tille at debian.org
Thu Apr 17 09:24:48 UTC 2014


Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : varscan
  Version         : 2.3.6
  Upstream Author : Dan Koboldt
* URL             : http://varscan.sourceforge.net/
* License         : NPOSL-3.0
  Programming Lang: Java
  Description     : variant detection in next-generation sequencing data
 Variant detection in massively parallel sequencing. For one sample,
 calls SNPs, indels, and consensus genotypes. For tumor-normal pairs,
 further classifies each variant as Germline, Somatic, or LOH, and also
 detects somatic copy number changes.


This package is maintained by the Debian Med team at
 git://anonscm.debian.org/debian-med/varscan.git



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