[Debian-med-packaging] Bug#772255: flexbar: bashism in /bin/sh script

Raphael Geissert atomo64 at gmail.com
Sat Dec 6 11:57:09 UTC 2014


Package: flexbar
Severity: minor
Version: 2.50-1
User: debian-release at lists.debian.org
Usertags: goal-dash

Hi,

I've ran checkbashisms (from the 'devscripts' package) over the whole
archive and I found that your package has a /bin/sh script that uses a
"bashism".

checkbashisms' output:
> possible bashism in
> ./usr/share/doc/flexbar/examples/flexbar_test_csfasta.sh line 10
> (exit|return with negative status code):
> exit -1
> possible bashism in
> ./usr/share/doc/flexbar/examples/flexbar_test_csfasta.sh line 23
> (exit|return with negative status code):
> exit -1
> possible bashism in
> ./usr/share/doc/flexbar/examples/flexbar_test_csfasta.sh line 36
> (exit|return with negative status code):
> exit -1
> possible bashism in
> ./usr/share/doc/flexbar/examples/flexbar_test_csfasta.sh line 49
> (exit|return with negative status code):
> exit -1
> possible bashism in
> ./usr/share/doc/flexbar/examples/flexbar_test_csfasta.sh line 62
> (exit|return with negative status code):
> exit -1
> possible bashism in
> ./usr/share/doc/flexbar/examples/flexbar_test_csfastq.sh line 10
> (exit|return with negative status code):
> exit -1
> possible bashism in
> ./usr/share/doc/flexbar/examples/flexbar_test_csfastq.sh line 23
> (exit|return with negative status code):
> exit -1
> possible bashism in
> ./usr/share/doc/flexbar/examples/flexbar_test_csfastq.sh line 36
> (exit|return with negative status code):
> exit -1
> possible bashism in
> ./usr/share/doc/flexbar/examples/flexbar_test_csfastq.sh line 49
> (exit|return with negative status code):
> exit -1
> possible bashism in
> ./usr/share/doc/flexbar/examples/flexbar_test_csfastq.sh line 62
> (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_fasta.sh
> line 10 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_fasta.sh
> line 23 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_fasta.sh
> line 36 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_fasta.sh
> line 49 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_fasta.sh
> line 62 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_fastq.sh
> line 10 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_fastq.sh
> line 23 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_fastq.sh
> line 36 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_fastq.sh
> line 49 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_fastq.sh
> line 62 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_zip.sh
> line 10 (exit|return with negative status code):
> exit -1
> possible bashism in ./usr/share/doc/flexbar/examples/flexbar_test_zip.sh
> line 23 (exit|return with negative status code):
> exit -1


Not using bash (or a Debian Policy compliant shell interpreter that doesn't
provide such an extra feature) as /bin/sh is likely to lead to errors or
unexpected behaviours. Please be aware that dash is the default /bin/sh.

Please closely examine the above output and the script, and determine
what the proper severity of the bug is, and adjust it accordingly. If
it's important or greater please hurry to get this fixed for jessie.

Hints about how to fix bashisms can be found at:
https://wiki.ubuntu.com/DashAsBinSh

Thanks in advance,
Raphael Geissert



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