[Debian-med-packaging] Bug#733248: seqan: FTBFS with test suite errors

Holtgrewe, Manuel manuel.holtgrewe at fu-berlin.de
Tue Jan 28 07:21:13 UTC 2014


Simply remove the line with "add_test" in the core/apps/splazers/CMakeLists.txt

Sorry for the delayed reply.

HTH,
Manuel
________________________________________
From: Andreas Tille [andreas at an3as.eu]
Sent: Monday, January 27, 2014 8:42 PM
To: Holtgrewe, Manuel
Cc: 733248 at bugs.debian.org; Filippo Rusconi
Subject: Re: Bug#733248: seqan: FTBFS with test suite errors

Hi Manuel,

ping?  How can wie disable the test?

Kind regards

          Andreas.

On Wed, Jan 08, 2014 at 06:36:06PM +0100, Andreas Tille wrote:
> Hi Manuel,
>
> On Wed, Jan 08, 2014 at 06:20:05PM +0100, Holtgrewe, Manuel wrote:
> > Hi Andreas,
> >
> > my recommendation is to disable this test for 1.4.1.
>
> This was my first idea - but *how* can I do this.  I have no idea how
> this test suite works.  Any patch would be really welcome.
>
> Thanks for your cooperation
>
>        Andreas.
>
> > Cheers,
> > Manuel
> > ________________________________________
> > From: Andreas Tille [tille at debian.org]
> > Sent: Thursday, January 02, 2014 1:29 PM
> > To: 733248 at bugs.debian.org; Holtgrewe, Manuel
> > Cc: Filippo Rusconi
> > Subject: Re: Bug#733248: seqan: FTBFS with test suite errors
> >
> > Hi Manuel,
> >
> > I can confirm that the problem reported here is now also true in amd64
> > which I realised when rebuilding the package.  If you go to the build
> > log for i386 at
> >
> >    https://buildd.debian.org/status/fetch.php?pkg=seqan&arch=i386&ver=1.4.1-2&stamp=1386115036
> >
> > and seek for
> >
> >    10/80 Test #10: app_test_splazers
> >
> > you find a failure.  I'm attaching a build log from my amd64 machine
> > which also ends up in failures.  Do you have any recommendation (besides
> > simply deactivating the tests in the build process)?
> >
> > Kind regards
> >
> >        Andreas.
> >
> > On Fri, Dec 27, 2013 at 02:25:39PM -0500, Aaron M. Ucko wrote:
> > > Source: seqan
> > > Version: 1.4.1-2
> > > Severity: serious
> > > Justification: fails to build from source (but built successfully in the past)
> > >
> > > Builds of seqan failed on multiple platforms due to test suite errors, as
> > > detailed at https://buildd.debian.org/status/logs.php?pkg=seqan&ver=1.4.1-2.
> > > Specifically, the i386, powerpc, and s390x builds all ran into errors; most
> > > of the remaining failures stemmed from exceeding system resources during
> > > actual compilation or linking.
> > >
> > > Could you please take a look?
> > >
> > > Thanks!
> > >
> > > _______________________________________________
> > > Debian-med-packaging mailing list
> > > Debian-med-packaging at lists.alioth.debian.org
> > > http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-packaging
> > >
> >
> > --
> > http://fam-tille.de
> >
>
> --
> http://fam-tille.de

--
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