[Debian-med-packaging] Bug#751277: python-biopython: FTBFS on mips* powerpc s390x

Scott Kitterman debian at kitterman.com
Wed Jun 11 16:46:08 UTC 2014


Source: python-biopython
Version: 1.64+dfsg-1
Severity: serious
Justification: fails to build from source (but built successfully in the past)

All four archs fail with a similar error:

E: pybuild pybuild:256: test: plugin custom failed with: exit code=1: mkdir -p /«BUILDDIR»/python-biopython-1.64+dfsg/.pybuild/pythonX.Y_2.7/build/Doc; \
                             cp -a Doc/Tutorial.tex /«BUILDDIR»/python-biopython-1.64+dfsg/.pybuild/pythonX.Y_2.7/build/Doc; \
                             cp -a Tests /«BUILDDIR»/python-biopython-1.64+dfsg/.pybuild/pythonX.Y_2.7/build; \
                             cd /«BUILDDIR»/python-biopython-1.64+dfsg/.pybuild/pythonX.Y_2.7/build/Tests; \
                             env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME=/tmp python2.7 run_tests.py --offline
dh_auto_test: pybuild --test -i python{version} -p 2.7 --test --system=custom --test-args=mkdir -p {build_dir}/Doc; \
                             cp -a Doc/Tutorial.tex {build_dir}/Doc; \
                             cp -a Tests {build_dir}; \
                             cd {build_dir}/Tests; \
                             env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME=/tmp {interpreter} run_tests.py --offline --dir . returned exit code 13
make[1]: *** [override_dh_auto_test] Error 13
debian/rules:56: recipe for target 'override_dh_auto_test' failed
make[1]: Leaving directory '/«BUILDDIR»/python-biopython-1.64+dfsg'
make: *** [build-arch] Error 2
debian/rules:48: recipe for target 'build-arch' failed



More information about the Debian-med-packaging mailing list