[Debian-med-packaging] Bug#742921: python-htseq: python.numpy dtype size error
Henry Amrhein
hamrhein at caltech.edu
Sat Mar 29 00:00:28 UTC 2014
Package: python-htseq
Version: 0.5.4p3-2
Severity: normal
Here's a trace of the error message received when trying to import HTSeq:
Traceback (most recent call last):
File
"/usr/local/lib/R/site-library/DEXSeq/python_scripts/dexseq_prepare_annotation.py",
line 33, in <module>
import HTSeq
File "/usr/lib/python2.7/dist-packages/HTSeq/__init__.py", line 9, in
<module>
from _HTSeq import *
File "numpy.pxd", line 155, in init HTSeq._HTSeq (src/_HTSeq.c:33074)
ValueError: numpy.dtype has the wrong size, try recompiling
-- System Information:
Debian Release: 7.4
APT prefers stable-updates
APT policy: (500, 'stable-updates'), (500, 'testing'), (500, 'stable')
Architecture: amd64 (x86_64)
Kernel: Linux 3.2.0-4-amd64 (SMP w/24 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Versions of packages python-htseq depends on:
ii libc6 2.18-4
ii libgcc1 1:4.8.2-16
ii libstdc++6 4.8.2-16
ii python 2.7.5-5
python-htseq recommends no packages.
python-htseq suggests no packages.
-- no debconf information
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