[Debian-med-packaging] Bug#778832: ITP: stacks -- pipeline for building loci from short-read DNA sequences

Andreas Tille tille at debian.org
Fri Feb 20 12:09:03 UTC 2015


Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : stacks
  Version         : 1.25
  Upstream Author : Julian Catchen <jcatchen at uoregon.edu>
* URL             : http://creskolab.uoregon.edu/stacks/
* License         : GPL
  Programming Lang: C++
  Description     : pipeline for building loci from short-read DNA sequences
 Stacks is a software pipeline for building loci from short-read sequences,
 such as those generated on the Illumina platform. Stacks was developed to work
 with restriction enzyme-based data, such as RAD-seq, for the purpose of
 building genetic maps and conducting population genomics and phylogeography.


The package was initially prepared by Tim Booth from BioLinux and will be
maintained by the Debian Med team at
   svn://anonscm.debian.org/debian-med/trunk/packages/stacks/trunk/



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