[Debian-med-packaging] Problems with openssl when upgrading r-bioc-rtracklayer

[Andreas Tille]

Hi,

I tried to upgrade r-bioc-rtracklayer[1] to the latest upstream version
(see trunk in SVN) but the build failed with:

* installing *source* package 'rtracklayer' ...
./configure: line 1676: syntax error near unexpected token `OPENSSL,'
./configure: line 1676: `PKG_CHECK_MODULES(OPENSSL, openssl >= 1.0, OPENSSL="yes", OPENSSL="no")'
ERROR: configuration failed for package 'rtracklayer'
* removing '/build/r-bioc-rtracklayer-1.34.1/debian/r-bioc-rtracklayer/usr/lib/R/site-library/rtracklayer'
dh_auto_install: R CMD INSTALL -l /build/r-bioc-rtracklayer-1.34.1/debian/r-bioc-rtracklayer/usr/lib/R/site-library --clean . --built-timestamp='Wed, 30 Nov 2016 22:37:27 +0100' returned ex


This check results from

PKG_CHECK_MODULES(OPENSSL, [openssl >= 1.0], [OPENSSL="yes"], [OPENSSL="no"])

in configure.ac - I have no idea why this fails.  Any helpful hint?

Kind regards

        Andreas.

[1] svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-rtracklayer/trunk/

-- 
http://fam-tille.de