[Debian-med-packaging] Bug#811866: hyphy: FTBFS with GCC 6: no matching function for call to

[Martin Michlmayr]

Package: hyphy
Version: 2.2.6+dfsg-3
Severity: important
User: debian-gcc at lists.debian.org
Usertags: ftbfs-gcc-6 gcc-6-no-match

This package fails to build with GCC 6.  GCC 6 has not been released
yet, but it's expected that GCC 6 will become the default compiler for
stretch.

Note that only the first error is reported; there might be more.  You
can find a snapshot of GCC 6 in experimental.  To build with GCC 6,
you can set CC=gcc-6 CXX=g++-6 explicitly.

You may be able to find out more about this issue at
https://gcc.gnu.org/gcc-6/changes.html

> sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on dl580gen9-02.hlinux
...
> [ 35%] Building CXX object CMakeFiles/HYPHYGTK.dir/src/gui/HYModelWindow.cpp.o
> /usr/bin/c++   -DGDK_PIXBUF_ENABLE_BACKEND -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D_SLKP_USE_SSE_INTRINSICS -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__HYPHY_GTK__ -D__UNIX__ -I/<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include -I/<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/lib/Link -I/<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/new/include -I/<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/gui/include -I/<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/gui/include/Components -I/<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/gui/include/WindowClasses -I/<<BUILDDIR>>/hyphy-2.2.6+dfsg/contrib/gtest-1.7.0/include -I/<<BUILDDIR>>/hyphy-2.2.6+dfsg/tests/gtests -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -I/usr/include/gtk-2.0 -I/usr/include/freetype2 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/atk-1.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/lib/x86_64-linux-gnu/gtk-2.0/include -I/<<BUILDDIR>>/hyphy-2.2
> .6+dfsg/src/gui/gtk/include -I/<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/gui/gtk/include/Components -I/Developer/Headers/FlatCarbon  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2    -g -fsigned-char -O3 -msse3   -o CMakeFiles/HYPHYGTK.dir/src/gui/HYModelWindow.cpp.o -c /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/gui/HYModelWindow.cpp
> /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/gui/HYModelWindow.cpp: In member function 'virtual bool _HYModelWindow::ProcessEvent(_HYEvent*)':
> /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/gui/HYModelWindow.cpp:860:40: error: no matching function for call to '_Formula::_Formula(_String&, NULL, bool)'
>              _Formula f (cText,nil,false);
>                                         ^
> 
> In file included from /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include/parser.h:54:0,
>                  from /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include/batchlan.h:44,
>                  from /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/gui/include/Components/HYTableComponent.h:13,
>                  from /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/gui/include/WindowClasses/HYModelWindow.h:13,
>                  from /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/gui/HYModelWindow.cpp:41:
> /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include/formula.h:88:5: note: candidate: _Formula::_Formula(_PMathObj, bool)
>      _Formula (_PMathObj, bool isAVar = false);
>      ^~~~~~~~
> 
> /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include/formula.h:88:5: note:   candidate expects 2 arguments, 3 provided
> /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include/formula.h:87:5: note: candidate: _Formula::_Formula(_String&, _VariableContainer*, _String*)
>      _Formula (_String&,_VariableContainer* theParent=nil,_String* errorString = nil);
>      ^~~~~~~~
> 
> /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include/formula.h:87:5: note:   no known conversion for argument 3 from 'bool' to '_String*'
> /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include/formula.h:86:5: note: candidate: _Formula::_Formula()
>      _Formula (void);
>      ^~~~~~~~
> 
> /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include/formula.h:86:5: note:   candidate expects 0 arguments, 3 provided
> /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include/formula.h:79:9: note: candidate: _Formula::_Formula(const _Formula&)
>  class   _Formula   // a computational formula
>          ^~~~~~~~
> 
> /<<BUILDDIR>>/hyphy-2.2.6+dfsg/src/core/include/formula.h:79:9: note:   candidate expects 1 argument, 3 provided
> CMakeFiles/HYPHYGTK.dir/build.make:785: recipe for target 'CMakeFiles/HYPHYGTK.dir/src/gui/HYModelWindow.cpp.o' failed

-- 
Martin Michlmayr
Linux for HPE Helion, Hewlett Packard Enterprise