[Debian-med-packaging] Bug#824048: Any change in blastp? (Was: Bug#824048: python-biopython: FTBFS: AssertionError: 10 != 1)

[Peter Cock]

Great - I'm glad that made sense, my email had more typos than usual
as I was in a hurry to leave the office earlier.

Thanks,

Peter

On Thu, May 19, 2016 at 4:20 PM, Andreas Tille <andreas at fam-tille.de> wrote:
> Hi Peter,
>
> I've just uploaded a package featuring the patch.
>
> Thanks a lot for the quick and helpful response
>
>       Andreas.
>
> On Thu, May 19, 2016 at 03:31:59PM +0100, Peter Cock wrote:
>> RE: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=824048
>>
>> I've committed this as "fix",
>>
>> https://github.com/biopython/biopython/commit/cb5b8f7cf16dfa9aada8d3c71ab8d588ebf0693f
>>
>> This was a sanity test which failed due to a change in the NCBI output.
>>
>> We don't currently try to parse the plain text output in this test
>> (the NCBI discourage parsing the plain text output, and we'd like
>> to drop our plain text BLAST parser anyway).
>>
>> If it is easier, you could just comment out or remote this for
>> the Biopython 1.66 Debian package?
>>
>> Thanks for letting us know,
>>
>> Peter
>>
>
> --
> http://fam-tille.de