[Debian-med-packaging] Bug#824048: Any change in blastp? (Was: Bug#824048: python-biopython: FTBFS: AssertionError: 10 != 1)

[Andreas Tille]

Hi Peter,

I've just uploaded a package featuring the patch.

Thanks a lot for the quick and helpful response

      Andreas.

On Thu, May 19, 2016 at 03:31:59PM +0100, Peter Cock wrote:
> RE: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=824048
> 
> I've committed this as "fix",
> 
> https://github.com/biopython/biopython/commit/cb5b8f7cf16dfa9aada8d3c71ab8d588ebf0693f
> 
> This was a sanity test which failed due to a change in the NCBI output.
> 
> We don't currently try to parse the plain text output in this test
> (the NCBI discourage parsing the plain text output, and we'd like
> to drop our plain text BLAST parser anyway).
> 
> If it is easier, you could just comment out or remote this for
> the Biopython 1.66 Debian package?
> 
> Thanks for letting us know,
> 
> Peter
> 

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