[Debian-med-packaging] Bug#881331: bcftools: needs a versioned dependency on libhts2

[Andreas Tille]

Hi,

Graham commited according fixes in Git.  Graham, I'm perfectly fine if you
(or anybody else) would upload.

Kind regards

     Andreas.

control: tags -1 pending

On Fri, Nov 10, 2017 at 01:27:48PM +0100, Mattia Rizzolo wrote:
> Source: bcftools
> Version: 1.5-3
> Severity: serious
> Control: block -1 by 879886
> 
> bcftools needs a versioned dependency on libhts2, since it uses a symbol
> that apeared only after the 1.5 release:
> 
> mattia at warren ~/pbuilder/result/sid/amd64/foo/usr/bin % readelf -s bcftools|grep hts_log
>    188: 0000000000000000     0 FUNC    GLOBAL DEFAULT  UND hts_log
> 
> I'm opening this bug, and calling for a manual action instead of a plain
> binNMU, since the situation of htlib/pysam/bcftools is underoptimal, and
> therefore I recommend adding a versioned build-dependency as well to
> make sure to build with an htslib version shipping with a symbols file.
> 
> -- 
> regards,
>                         Mattia Rizzolo
> 
> GPG Key: 66AE 2B4A FCCF 3F52 DA18  4D18 4B04 3FCD B944 4540      .''`.
> more about me:  https://mapreri.org                             : :'  :
> Launchpad user: https://launchpad.net/~mapreri                  `. `'`
> Debian QA page: https://qa.debian.org/developer.php?login=mattia  `-



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