[Debian-med-packaging] Bug#894781: bedtools: autopkgtest fails while it succeeded in the past

Liubov Chuprikova chuprikovalv at gmail.com
Thu Apr 5 11:16:16 BST 2018


Hi Andreas, hi Charles,

On Thu, 5 Apr 2018 at 09:34 Andreas Tille <andreas at an3as.eu> wrote:

> Hi,
>
> I confirm that the tests are throwing errors (despite I can not
> reproduce the issue uncovered at ci.debian.net[1]) when running the also
> user accessible script /usr/share/doc/bedtools/run-unit-test on the
> local machine.  Alternatively there are some issues with the new version
> of samtools / tabix.
>
> It somehow seems the test script is not adapted to the output of the
> changed upstream code.
>
> Charles, I keep you in CC since you once wrote the test script.
> Liubov, I keep you in CC since you might have a look once you
> are finished with ncbi-tools6.
>

I'll be able to take on this bug today's evening or tomorrow.

Regards,
Liubov
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