[Debian-med-packaging] Bug#900764: ITP: minimac4 -- Fast Imputation Based on State Space Reduction HMM

Dylan Aïssi bob.dybian at gmail.com
Mon Jun 4 15:45:18 BST 2018


Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>

Package name: minimac4
URL: https://genome.sph.umich.edu/wiki/Minimac4
License: GPL-3
Description: Fast Imputation Based on State Space Reduction HMM
 Minimac4 is a lower memory and more computationally efficient implementation
 of "minimac2/3". It is an algorithm for genotypic imputation that works on
 phased genotypes (say from MaCH).
 .
 Minimac4 is designed to handle very large reference panels in a more
 computationally efficient way with no loss of accuracy. This algorithm
 analyzes only the unique sets of haplotypes in small genomic segments, thereby
 saving on time\-complexity, computational memory but no loss in degree of
 accuracy.

This package will be maintained by the Debian Med Packaging Team at:
https://salsa.debian.org/med-team/minimac4



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