[Debian-med-packaging] Bug#900765: ITP: libstatgen -- processing and analyzing next generation sequencing and genotyping data library
Dylan Aïssi
bob.dybian at gmail.com
Mon Jun 4 15:55:14 BST 2018
Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Package name: libstatgen
URL: https://genome.sph.umich.edu/wiki/C++_Library:_libStatGen
License: GPL-3+
Description: processing and analyzing next generation sequencing and
genotyping data library
libStatGen is a library for statistical genetic programs. It includes some:
A. General Operation Classes including: File/Stream I/O, String processing
and Parameter Parsing.
B. Statistical Genetic Specific Classes including: Handling Common file
formats (Accessors to get/set values, Indexed access to BAM files) and
some utility classes, including: 1. Cigar: interpretation and mapping
between query and reference. 2. Pileup: structured access to data by
individual reference position.
This library is a dependency of minimac4 (#900764).
The package will be maintained by the Debian Med Packaging Team at:
https://salsa.debian.org/med-team/libstatgen/
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