[Debian-med-packaging] Bug#944242: Test issues with BioPython 1.75

[Andreas Tille]

On Wed, Dec 04, 2019 at 01:55:26PM +0000, Peter Cock wrote:
> Good. If you are still missing Tests/Fasta/flowers.pro.gz that's odd,
> since it was in the official tar ball:
> 
> https://files.pythonhosted.org/packages/33/55/becf2b99556588d22b542f3412990bfc79b674e198d9bc58f7bbc333439e/biopython-1.75.tar.gz

Arghh again.  The test script is unzipping all files before running the
test since in the Debian doc dir most files are gzipped.  After gzipping
it again this test is fine.

So the only remaining issue is:

======================================================================
ERROR: test_doctests (test_Tutorial.TutorialTestCase)
Run tutorial doctests.
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/tmp/autopkgtest.hiPio2/autopkgtest_tmp/Tests/test_Tutorial.py", line 260, in test_doctests
    (len(failures), ", ".join(failures)))
ValueError: 1 Tutorial doctests failed: test_chapter_align_line_02819

----------------------------------------------------------------------
Ran 194 tests in 204.479 seconds


and I think we agreed that I'll ignore this test.

Kind regards

      Andreas.

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