[Debian-med-packaging] Bug#923750: gdcm: FTBFS in buster/sid
Santiago Vila
sanvila at debian.org
Tue Mar 5 00:19:27 GMT 2019
Package: src:gdcm
Version: 2.8.8-6
Severity: serious
Tags: ftbfs
Dear maintainer:
I tried to build this package in buster but it failed:
--------------------------------------------------------------------------------
[...]
debian/rules binary-indep
dh binary-indep --with cli --with python3 --with javahelper --buildsystem=cmake+ninja
dh_update_autotools_config -i -O--buildsystem=cmake\+ninja
dh_autoreconf -i -O--buildsystem=cmake\+ninja
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- -DCMAKE_SKIP_RPATH=ON -DCMAKE_BUILD_TYPE:STRING=None -DGDCM_DOXYGEN_NO_FOOTER:BOOL=ON -DGDCM_BUILD_APPLICATIONS:BOOL=ON -DGDCM_DOCUMENTATION:BOOL=ON -DGDCM_VTK_DOCUMENTATION:BOOL=ON -DDOCUMENTATION_DOWNLOAD_VTK_TAGFILE:BOOL=OFF -DGDCM_PDF_DOCUMENTATION:BOOL=ON -DGDCM_BUILD_SHARED_LIBS:BOOL=ON -DGDCM_WRAP_PYTHON:BOOL=ON -DGDCM_WRAP_CSHARP:BOOL=0 -DGDCM_WRAP_JAVA:BOOL=ON -DGDCM_DEFAULT_JAVA_VERSION:STRING=1.8 -DGDCM_WRAP_PHP:BOOL=OFF -DGDCM_USE_PVRG:BOOL=ON -DGDCM_USE_SYSTEM_PVRG:BOOL=ON -DGMCS_EXECUTABLE:FILEPATH=/usr/bin/mono-csc -DGDCM_BUILD_TESTING:BOOL=OFF -DGDCM_USE_SYSTEM_EXPAT:BOOL=ON -DGDCM_USE_SYSTEM_UUID:BOOL=ON -DGDCM_USE_SYSTEM_ZLIB:BOOL=ON -DGDCM_USE_SYSTEM_OPENJPEG:BOOL=ON -DGDCM_USE_SYSTEM_OPENSSL:BOOL=ON -DGDCM_USE_SYSTEM_CHARLS:BOOL=ON -DGDCM_USE_SYSTEM_POPPLER:BOOL=ON -DGDCM_USE_SYSTEM_LIBXML2:BOOL=ON -DGDCM_USE_SYSTEM_JSON:BOOL=ON -DGDCM_USE_PARAVIEW:BOOL=OFF -DGDCM_USE_ACTIVIZ:BOOL=OFF -DGDCM_USE_SYSTEM_PAPYRUS3:BOOL=ON -DGDCM_USE_SYSTEM_SOCKETXX:BOOL=ON -DPython_ADDITIONAL_VERSIONS:STRING=3.7 -DGDCM_INSTALL_DOC_DIR:STRING=share/doc/gdcm-doc -DTAGFILES:STRING="/usr/share/doc/vtk-doc/html/vtk7.1.tag=/usr/share/doc/vtk-doc/html/" -DGDCM_INSTALL_PYTHONMODULE_DIR:STRING=lib/python/dist-packages -DGDCM_INSTALL_JAVAMODULE_DIR:STRING=lib/x86_64-linux-gnu/jni -DGDCM_NO_PYTHON_LIBS_LINKING:BOOL=ON -DGDCM_NO_VTKJAVA_LIBS_LINKING:BOOL=ON -DGDCM_INSTALL_LIB_DIR:STRING=lib/x86_64-linux-gnu -DGDCM_USE_VTK:BOOL=ON -DVTK_JAVA_JAR=/usr/share/java/vtk7.jar
cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -GNinja -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_SKIP_RPATH=ON -DCMAKE_BUILD_TYPE:STRING=None -DGDCM_DOXYGEN_NO_FOOTER:BOOL=ON -DGDCM_BUILD_APPLICATIONS:BOOL=ON -DGDCM_DOCUMENTATION:BOOL=ON -DGDCM_VTK_DOCUMENTATION:BOOL=ON -DDOCUMENTATION_DOWNLOAD_VTK_TAGFILE:BOOL=OFF -DGDCM_PDF_DOCUMENTATION:BOOL=ON -DGDCM_BUILD_SHARED_LIBS:BOOL=ON -DGDCM_WRAP_PYTHON:BOOL=ON -DGDCM_WRAP_CSHARP:BOOL=0 -DGDCM_WRAP_JAVA:BOOL=ON -DGDCM_DEFAULT_JAVA_VERSION:STRING=1.8 -DGDCM_WRAP_PHP:BOOL=OFF -DGDCM_USE_PVRG:BOOL=ON -DGDCM_USE_SYSTEM_PVRG:BOOL=ON -DGMCS_EXECUTABLE:FILEPATH=/usr/bin/mono-csc -DGDCM_BUILD_TESTING:BOOL=OFF -DGDCM_USE_SYSTEM_EXPAT:BOOL=ON -DGDCM_USE_SYSTEM_UUID:BOOL=ON -DGDCM_USE_SYSTEM_ZLIB:BOOL=ON -DGDCM_USE_SYSTEM_OPENJPEG:BOOL=ON -DGDCM_USE_SYSTEM_OPENSSL:BOOL=ON -DGDCM_USE_SYSTEM_CHARLS:BOOL=ON -DGDCM_USE_SYSTEM_POPPLER:BOOL=ON -DGDCM_USE_SYSTEM_LIBXML2:BOOL=ON -DGDCM_USE_SYSTEM_JSON:BOOL=ON -DGDCM_USE_PARAVIEW:BOOL=OFF -DGDCM_USE_ACTIVIZ:BOOL=OFF -DGDCM_USE_SYSTEM_PAPYRUS3:BOOL=ON -DGDCM_USE_SYSTEM_SOCKETXX:BOOL=ON -DPython_ADDITIONAL_VERSIONS:STRING=3.7 -DGDCM_INSTALL_DOC_DIR:STRING=share/doc/gdcm-doc -DTAGFILES:STRING=/usr/share/doc/vtk-doc/html/vtk7.1.tag=/usr/share/doc/vtk-doc/html/ -DGDCM_INSTALL_PYTHONMODULE_DIR:STRING=lib/python/dist-packages -DGDCM_INSTALL_JAVAMODULE_DIR:STRING=lib/x86_64-linux-gnu/jni -DGDCM_NO_PYTHON_LIBS_LINKING:BOOL=ON -DGDCM_NO_VTKJAVA_LIBS_LINKING:BOOL=ON -DGDCM_INSTALL_LIB_DIR:STRING=lib/x86_64-linux-gnu -DGDCM_USE_VTK:BOOL=ON -DVTK_JAVA_JAR=/usr/share/java/vtk7.jar ..
-- The C compiler identification is GNU 8.2.0
-- The CXX compiler identification is GNU 8.2.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for inttypes.h
-- Looking for inttypes.h - found
-- Found POPPLER: /usr/lib/x86_64-linux-gnu/libpoppler.so
-- Found LibXml2: /usr/lib/x86_64-linux-gnu/libxml2.so (found version "2.9.4")
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.29")
-- Checking for module 'libopenjp2'
-- Found libopenjp2, version 2.3.0
-- Found OpenJPEG: openjp2 (found suitable version "2.3.0", minimum required is "2.0.0")
-- Found PVRGJPEG: /usr/bin/pvrg-jpeg
-- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11")
-- Found OpenSSL: /usr/lib/x86_64-linux-gnu/libssl.so;/usr/lib/x86_64-linux-gnu/libcrypto.so
-- Found UUID: /usr/lib/x86_64-linux-gnu/libuuid.so
-- Found EXPAT: /usr/lib/x86_64-linux-gnu/libexpat.so (found version "2.2.6")
-- Found JSON: /usr/lib/x86_64-linux-gnu/libjson-c.so
-- Found PAPYRUS3: /usr/lib/libPapyrus3.a
-- Looking for include file sys/time.h
-- Looking for include file sys/time.h - found
-- Looking for include files sys/time.h, winsock.h
-- Looking for include files sys/time.h, winsock.h - not found
-- Looking for include files sys/time.h, byteswap.h
-- Looking for include files sys/time.h, byteswap.h - found
-- Performing Test GDCM_HAVE_BYTESWAP_H
-- Performing Test GDCM_HAVE_BYTESWAP_H - Success
-- Looking for rpc.h
-- Looking for rpc.h - not found
-- Looking for langinfo.h
-- Looking for langinfo.h - found
-- Looking for nl_langinfo
-- Looking for nl_langinfo - found
-- Looking for strcasecmp
-- Looking for strcasecmp - found
-- Looking for strncasecmp
-- Looking for strncasecmp - found
-- Looking for snprintf
-- Looking for snprintf - found
-- Looking for strptime
-- Looking for strptime - found
-- Looking for _stricmp
-- Looking for _stricmp - not found
-- Looking for _strnicmp
-- Looking for _strnicmp - not found
-- Looking for _snprintf
-- Looking for _snprintf - not found
-- Looking for lround
-- Looking for lround - found
-- Looking for gettimeofday
-- Looking for gettimeofday - found
-- Looking for json_object_object_get_ex
-- Looking for json_object_object_get_ex - found
-- Performing Test GDCM_CXX_HAS_FUNCTION
-- Performing Test GDCM_CXX_HAS_FUNCTION - Success
-- Performing Test GDCM_HAVE_WCHAR_IFSTREAM
-- Performing Test GDCM_HAVE_WCHAR_IFSTREAM - Failed
-- Performing Test GDCM_HAVE_CMS_RECIPIENT_PASSWORD
-- Performing Test GDCM_HAVE_CMS_RECIPIENT_PASSWORD - Success
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Check if the system is big endian
-- Searching 16 bit integer
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Using unsigned short
-- Check if the system is big endian - little endian
-- The imported target "vtkParseOGLExt" references the file
"/usr/bin/vtkParseOGLExt-7.1"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingPythonTkWidgets" references the file
"/usr/lib/x86_64-linux-gnu/libvtkRenderingPythonTkWidgets.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtk" references the file
"/usr/bin/vtk"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "pvtk" references the file
"/usr/bin/pvtk"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- Looking for stdlib.h
-- Looking for stdlib.h - found
-- Found Doxygen: /usr/bin/doxygen (found version "1.8.13") found components: doxygen dot
-- Found LATEX: /usr/bin/latex
-- Could NOT find LibXslt (missing: LIBXSLT_LIBRARIES LIBXSLT_INCLUDE_DIR)
-- Your docbook install was found here :<delegateSystem systemIdStartString="http://docbook.sourceforge.net/release/xsl-ns/" catalog="file:///etc/xml/docbook-xsl-ns.xml"/>
CMake Warning (dev) at /usr/share/cmake-3.13/Modules/Documentation.cmake:16 (option):
Policy CMP0077 is not set: option() honors normal variables. Run "cmake
--help-policy CMP0077" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
For compatibility with older versions of CMake, option is clearing the
normal variable 'BUILD_DOCUMENTATION'.
Call Stack (most recent call first):
Utilities/doxygen/vtk/CMakeLists.txt:4 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Found SWIG: /usr/bin/swig3.0 (found suitable version "3.0.12", minimum required is "2.0.7")
-- Found PythonInterp: /usr/bin/python3.7 (found version "3.7.2")
-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.7m.so (found version "3.7.2+")
CMake Deprecation Warning at /usr/share/cmake-3.13/Modules/UseSWIG.cmake:524 (message):
SWIG_ADD_MODULE is deprecated. Use SWIG_ADD_LIBRARY instead.
Call Stack (most recent call first):
Wrapping/Python/CMakeLists.txt:93 (SWIG_ADD_MODULE)
CMake Warning (dev) at /usr/share/cmake-3.13/Modules/UseSWIG.cmake:564 (message):
Policy CMP0078 is not set. Run "cmake --help-policy CMP0078" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Call Stack (most recent call first):
/usr/share/cmake-3.13/Modules/UseSWIG.cmake:525 (swig_add_library)
Wrapping/Python/CMakeLists.txt:93 (SWIG_ADD_MODULE)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Will NOT use pyd extension
-- Found SWIG: /usr/bin/swig3.0 (found version "3.0.12")
-- Found Java: /usr/bin/java (found suitable version "11.0.2", minimum required is "1.8")
-- Found JNI: /usr/lib/jvm/default-java/lib/libjawt.so
CMake Deprecation Warning at /usr/share/cmake-3.13/Modules/UseSWIG.cmake:524 (message):
SWIG_ADD_MODULE is deprecated. Use SWIG_ADD_LIBRARY instead.
Call Stack (most recent call first):
Wrapping/Java/CMakeLists.txt:34 (SWIG_ADD_MODULE)
CMake Warning (dev) at /usr/share/cmake-3.13/Modules/UseSWIG.cmake:564 (message):
Policy CMP0078 is not set. Run "cmake --help-policy CMP0078" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Call Stack (most recent call first):
/usr/share/cmake-3.13/Modules/UseSWIG.cmake:525 (swig_add_library)
Wrapping/Java/CMakeLists.txt:34 (SWIG_ADD_MODULE)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Performing Test VTK_HAS_SMARTVOLUMEMAPPER
-- Performing Test VTK_HAS_SMARTVOLUMEMAPPER - Success
-- Performing Test VTK_HAS_IMAGERESLICEMAPPER
-- Performing Test VTK_HAS_IMAGERESLICEMAPPER - Success
-- Performing Test LIBPOPPLER_GLOBALPARAMS_CSTOR_HAS_PARAM
-- Performing Test LIBPOPPLER_GLOBALPARAMS_CSTOR_HAS_PARAM - Success
-- Performing Test LIBPOPPLER_PDFDOC_HAS_PDFVERSION
-- Performing Test LIBPOPPLER_PDFDOC_HAS_PDFVERSION - Failed
-- Performing Test LIBPOPPLER_CATALOG_HAS_STRUCTTREEROOT
-- Performing Test LIBPOPPLER_CATALOG_HAS_STRUCTTREEROOT - Success
-- Performing Test LIBPOPPLER_NEW_OBJECT_API
-- Performing Test LIBPOPPLER_NEW_OBJECT_API - Success
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
CMAKE_INSTALL_LIBDIR
CMAKE_INSTALL_LOCALSTATEDIR
CMAKE_INSTALL_RUNSTATEDIR
CMAKE_INSTALL_SYSCONFDIR
DOCUMENTATION_DOWNLOAD_VTK_TAGFILE
GDCM_USE_ACTIVIZ
GMCS_EXECUTABLE
TAGFILES
-- Build files have been written to: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
jh_linkjars -i -O--buildsystem=cmake\+ninja
debian/rules override_dh_auto_build-indep
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build -- DoxygenDoc
cd obj-x86_64-linux-gnu && LC_ALL=C.UTF-8 ninja -j1 -v DoxygenDoc
[1/3] cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen && /usr/bin/doxygen /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/Doxyfile && /usr/bin/cmake -E tar cfz /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/gdcm-2.8.8-doc.tar.gz html
warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
/<<PKGBUILDDIR>>/Source/MediaStorageAndFileFormat/gdcmPixmapReader.h:68: warning: Example StandardizeFiles.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/Source/MediaStorageAndFileFormat/gdcmPixmapWriter.h:64: warning: Example StandardizeFiles.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:6: warning: Example ClinicalTrialIdentificationWorkflow.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:8: warning: Example DecompressImage.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:10: warning: Example DecompressJPEGFile.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:20: warning: Example GenerateDICOMDIR.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:22: warning: Example ManipulateFile.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:25: warning: Example ReformatFile.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:27: warning: Example ScanDirectory.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:29: warning: Example SimplePrint.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:32: warning: Example StandardizeFiles.cs was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:67: warning: Example GenFakeImage.cxx was already documented. Ignoring documentation found here.
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/TestsList.txt:80: warning: Example PatchFile.cxx was already documented. Ignoring documentation found here.
warning: Included by graph for 'gdcmTypes.h' not generated, too many nodes. Consider increasing DOT_GRAPH_MAX_NODES.
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:57: warning: The following parameters of gdcm::CompositeNetworkFunctions::CEcho(const char *remote, uint16_t portno, const char *aetitle=NULL, const char *call=NULL) are not documented:
parameter 'remote'
parameter 'portno'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:104: warning: The following parameters of gdcm::CompositeNetworkFunctions::CFind(const char *remote, uint16_t portno, const BaseRootQuery *query, std::vector< DataSet > &retDataSets, const char *aetitle=NULL, const char *call=NULL) are not documented:
parameter 'remote'
parameter 'portno'
parameter 'query'
parameter 'retDataSets'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:91: warning: The following parameters of gdcm::CompositeNetworkFunctions::CMove(const char *remote, uint16_t portno, const BaseRootQuery *query, uint16_t portscp, const char *aetitle=NULL, const char *call=NULL, const char *outputdir=NULL) are not documented:
parameter 'remote'
parameter 'portno'
parameter 'query'
parameter 'portscp'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:63: warning: argument 'inMove' of command @param is not found in the argument list of gdcm::CompositeNetworkFunctions::ConstructQuery(ERootType inRootType, EQueryLevel inQueryLevel, const DataSet &queryds, EQueryType queryType=eFind)
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:69: warning: The following parameters of gdcm::CompositeNetworkFunctions::ConstructQuery(ERootType inRootType, EQueryLevel inQueryLevel, const DataSet &queryds, EQueryType queryType=eFind) are not documented:
parameter 'inRootType'
parameter 'inQueryLevel'
parameter 'queryds'
parameter 'queryType'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:117: warning: The following parameters of gdcm::CompositeNetworkFunctions::CStore(const char *remote, uint16_t portno, const Directory::FilenamesType &filenames, const char *aetitle=NULL, const char *call=NULL) are not documented:
parameter 'remote'
parameter 'portno'
parameter 'filenames'
/<<PKGBUILDDIR>>/Source/MediaStorageAndFileFormat/gdcmFileStreamer.h:84: warning: The following parameters of gdcm::FileStreamer::StartGroupDataElement(const PrivateTag &pt, size_t maxsizede=0, uint8_t startoffset=0) are not documented:
parameter 'pt'
parameter 'startoffset'
/<<PKGBUILDDIR>>/Source/Common/gdcmSmartPointer.h:27: warning: explicit link request to 'include' could not be resolved
This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=latex)
restricted \write18 enabled.
entering extended mode
(./_formulas.tex
LaTeX2e <2018-12-01>
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:57: warning: The following parameters of gdcm::CompositeNetworkFunctions::CEcho(const char *remote, uint16_t portno, const char *aetitle=NULL, const char *call=NULL) are not documented:
parameter 'remote'
parameter 'portno'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:104: warning: The following parameters of gdcm::CompositeNetworkFunctions::CFind(const char *remote, uint16_t portno, const BaseRootQuery *query, std::vector< DataSet > &retDataSets, const char *aetitle=NULL, const char *call=NULL) are not documented:
parameter 'remote'
parameter 'portno'
parameter 'query'
parameter 'retDataSets'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:91: warning: The following parameters of gdcm::CompositeNetworkFunctions::CMove(const char *remote, uint16_t portno, const BaseRootQuery *query, uint16_t portscp, const char *aetitle=NULL, const char *call=NULL, const char *outputdir=NULL) are not documented:
parameter 'remote'
parameter 'portno'
parameter 'query'
parameter 'portscp'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:63: warning: argument 'inMove' of command @param is not found in the argument list of gdcm::CompositeNetworkFunctions::ConstructQuery(ERootType inRootType, EQueryLevel inQueryLevel, const DataSet &queryds, EQueryType queryType=eFind)
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:69: warning: The following parameters of gdcm::CompositeNetworkFunctions::ConstructQuery(ERootType inRootType, EQueryLevel inQueryLevel, const DataSet &queryds, EQueryType queryType=eFind) are not documented:
parameter 'inRootType'
parameter 'inQueryLevel'
parameter 'queryds'
parameter 'queryType'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:117: warning: The following parameters of gdcm::CompositeNetworkFunctions::CStore(const char *remote, uint16_t portno, const Directory::FilenamesType &filenames, const char *aetitle=NULL, const char *call=NULL) are not documented:
parameter 'remote'
parameter 'portno'
parameter 'filenames'
/<<PKGBUILDDIR>>/Source/MediaStorageAndFileFormat/gdcmFileStreamer.h:84: warning: The following parameters of gdcm::FileStreamer::StartGroupDataElement(const PrivateTag &pt, size_t maxsizede=0, uint8_t startoffset=0) are not documented:
parameter 'pt'
parameter 'startoffset'
/<<PKGBUILDDIR>>/Source/Common/gdcmSmartPointer.h:27: warning: explicit link request to 'include' could not be resolved
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:57: warning: The following parameters of gdcm::CompositeNetworkFunctions::CEcho(const char *remote, uint16_t portno, const char *aetitle=NULL, const char *call=NULL) are not documented:
parameter 'remote'
parameter 'portno'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:104: warning: The following parameters of gdcm::CompositeNetworkFunctions::CFind(const char *remote, uint16_t portno, const BaseRootQuery *query, std::vector< DataSet > &retDataSets, const char *aetitle=NULL, const char *call=NULL) are not documented:
parameter 'remote'
parameter 'portno'
parameter 'query'
parameter 'retDataSets'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:91: warning: The following parameters of gdcm::CompositeNetworkFunctions::CMove(const char *remote, uint16_t portno, const BaseRootQuery *query, uint16_t portscp, const char *aetitle=NULL, const char *call=NULL, const char *outputdir=NULL) are not documented:
parameter 'remote'
parameter 'portno'
parameter 'query'
parameter 'portscp'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:63: warning: argument 'inMove' of command @param is not found in the argument list of gdcm::CompositeNetworkFunctions::ConstructQuery(ERootType inRootType, EQueryLevel inQueryLevel, const DataSet &queryds, EQueryType queryType=eFind)
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:69: warning: The following parameters of gdcm::CompositeNetworkFunctions::ConstructQuery(ERootType inRootType, EQueryLevel inQueryLevel, const DataSet &queryds, EQueryType queryType=eFind) are not documented:
parameter 'inRootType'
parameter 'inQueryLevel'
parameter 'queryds'
parameter 'queryType'
/<<PKGBUILDDIR>>/Source/MessageExchangeDefinition/gdcmCompositeNetworkFunctions.h:117: warning: The following parameters of gdcm::CompositeNetworkFunctions::CStore(const char *remote, uint16_t portno, const Directory::FilenamesType &filenames, const char *aetitle=NULL, const char *call=NULL) are not documented:
parameter 'remote'
parameter 'portno'
parameter 'filenames'
/<<PKGBUILDDIR>>/Source/MediaStorageAndFileFormat/gdcmFileStreamer.h:84: warning: The following parameters of gdcm::FileStreamer::StartGroupDataElement(const PrivateTag &pt, size_t maxsizede=0, uint8_t startoffset=0) are not documented:
parameter 'pt'
parameter 'startoffset'
/<<PKGBUILDDIR>>/Source/Common/gdcmSmartPointer.h:27: warning: explicit link request to 'include' could not be resolved
[2/3] cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen && /bin/sed -i.tmp -e 's/]{hyperref}/]{hyperref}\\hypersetup{pdftitle={GDCM\ 2.8.8\ Reference\ Manual},pdfauthor={Mathieu\ Malaterre\ and\ co.},pdfsubject={Grassroots\ DICOM\ API\ reference},pdfkeywords={GDCM,DICOM,Network,Query\/Retrieve,JPEG,Lossless\ JPEG,JPEG-LS,J2K,JPEG\ 2000,RLE},pdfpagemode={UseOutlines},bookmarks,bookmarksopen,pdfstartview={FitH},backref,colorlinks,linkcolor={black},citecolor={black},urlcolor={black},baseurl={http:\/\/gdcm.sourceforge.net}}\\hyperbaseurl{http:\/\/gdcm.sourceforge.net}/g' /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/latex/refman.tex && /bin/sed -i.tmp -e 's/\/build\/gdcm-Z9jnUs\/gdcm-2.8.8/gdcm/g' /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/latex/*.tex && make -C /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/latex
FAILED: Utilities/doxygen/latex/refman.pdf
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen && /bin/sed -i.tmp -e 's/]{hyperref}/]{hyperref}\\hypersetup{pdftitle={GDCM\ 2.8.8\ Reference\ Manual},pdfauthor={Mathieu\ Malaterre\ and\ co.},pdfsubject={Grassroots\ DICOM\ API\ reference},pdfkeywords={GDCM,DICOM,Network,Query\/Retrieve,JPEG,Lossless\ JPEG,JPEG-LS,J2K,JPEG\ 2000,RLE},pdfpagemode={UseOutlines},bookmarks,bookmarksopen,pdfstartview={FitH},backref,colorlinks,linkcolor={black},citecolor={black},urlcolor={black},baseurl={http:\/\/gdcm.sourceforge.net}}\\hyperbaseurl{http:\/\/gdcm.sourceforge.net}/g' /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/latex/refman.tex && /bin/sed -i.tmp -e 's/\/build\/gdcm-Z9jnUs\/gdcm-2.8.8/gdcm/g' /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/latex/*.tex && make -C /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/latex
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/latex'
rm -f *.ps *.dvi *.aux *.toc *.idx *.ind *.ilg *.log *.out *.brf *.blg *.bbl refman.pdf
pdflatex refman
This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex)
restricted \write18 enabled.
entering extended mode
(./refman.tex
LaTeX2e <2018-12-01>
make[2]: *** [Makefile:6: refman.pdf] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Utilities/doxygen/latex'
ninja: build stopped: subcommand failed.
dh_auto_build: cd obj-x86_64-linux-gnu && LC_ALL=C.UTF-8 ninja -j1 -v DoxygenDoc returned exit code 1
make[1]: *** [debian/rules:104: override_dh_auto_build-indep] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:49: binary-indep] Error 2
dpkg-buildpackage: error: debian/rules binary-indep subprocess returned exit status 2
--------------------------------------------------------------------------------
(The above is just how the build ends and not necessarily the most relevant part)
The build was made in my autobuilder with "dpkg-buildpackage -A"
and it also fails here:
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/gdcm.html
where you can get a full build log if you need it.
If this is really a bug in one of the build-depends, please use reassign and affects,
so that this is still visible in the BTS web page for this package.
Thanks.
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