[Debian-med-packaging] Bug#923457: test_likelihood_nh (Failed)

[Andreas Tille]

Hi Julien,

after fixing bug #923457 I realised that the package does not
build on all architectures[1]. S390x fails with[2]

 4/14 Test  #5: test_likelihood_nh ...............***Failed    2.44 sec

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\ 11 nodes loaded.
Theta0 set to 0.444785
Theta1 set to 0.137341
Theta2 set to 0.219281
Theta3 set to 0.759382
Theta4 set to 0.549516
Theta5 set to 0.925583
Theta6 set to 0.527333
Theta7 set to 0.891561
Theta8 set to 0.331932
Theta9 set to 0.523327
Initializing data structure............: Done.
Number of distinct sites...............: 363
Initializing data structure............: Done.
Number of distinct sites...............: 363

Optimizing... / 1
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Optimizing... / 1
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Optimizing... - 14

15: 5347.92 15: 5347.92
0.516673 0.516673
0.184681 0.184681
0.209158 0.209158
0.795359 0.795359
0.489372 0.489372
0.918414 0.918414
0.489537 0.489537
0.913968 0.913968
0.180359 0.180359
0.797456 0.797456
Initializing data structure............: Done.
Number of distinct sites...............: 365
Initializing data structure............: Done.
Number of distinct sites...............: 365

Optimizing... / 1
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Optimizing... / 1
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Optimizing... - 14
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Optimizing... / 17

18: 5391.43 18: 5391.43
0.60777 0.60777
0.127151 0.127151
0.189039 0.189039
0.788612 0.788612
0.564763 0.564763
0.941319 0.941319
0.565297 0.565297
0.844854 0.844854
0.357532 0.357532
0.717998 0.717998
Initializing data structure............: Done.
Number of distinct sites...............: 375
Initializing data structure............: Done.
Number of distinct sites...............: 375

Optimizing... / 1
Optimizing... - 2
Optimizing... \ 3
Optimizing... - 4
Optimizing... / 5
Optimizing... - 6
Optimizing... \ 7
Optimizing... - 8
Optimizing... / 9
Optimizing... - 10
Optimizing... \ 11
Optimizing... - 12
Optimizing... / 13
Optimizing... - 14


Optimizing... / 1
Optimizing... - 2
Optimizing... \ 3
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Optimizing... - 12
Optimizing... / 13
Optimizing... - 14

15: 5401.83 15: 5401.83
0.419181 0.419181
0.140299 0.140299
0.295 0.295
0.900203 0.900203
0.411605 0.411605
0.919716 0.919716
0.563041 0.563041
0.813833 0.813833
0.194868 0.194868
0.801315 0.801315
0.444785 0.514541 0.514541
0.137341 0.15071 0.15071
0.219281 0.231066 0.231066
0.759382 0.828058 0.828058
0.549516 0.48858 0.48858
0.925583 0.926483 0.926483
0.527333 0.539292 0.539292
0.891561 0.857552 0.857552
0.331932 0.244253 0.244253
0.523327 0.772256 0.772256


...

93% tests passed, 1 tests failed out of 14

Total Test time (real) =  31.15 sec

The following tests FAILED:
   5 - test_likelihood_nh (Failed)


I remember that I once had even a test failure on my local amd64 - so
this test might be a bit undetermined.  Please confirm this and I'd be
happy if you could send an *as simple as possible* patch or simply
deactivate the patch.  We are in deep freeze and need to find a quick
and also simple solution.

Kind regards

       Andreas.


[1] https://buildd.debian.org/status/package.php?p=libbpp-phyl
[2] https://buildd.debian.org/status/fetch.php?pkg=libbpp-phyl&arch=s390x&ver=2.4.1-2&stamp=1551477555&raw=0

-- 
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