[Debian-med-packaging] Please check hmmer2 autopkgtest

[Joshua Marshall]

I've been poking at it here and there.  The thing is wound pretty tight so
I've just taken to a group up rework.  Check upstream for actual
support--he won't even talk to me.  Guy can get pretty dramatic.

On Wed, Aug 12, 2020, 05:57 Andreas Tille <andreas at an3as.eu> wrote:

> Hi,
>
> I checked the Debian Med packages that are using pvm but possibly should
> not[1].  I spotted hmmer2.  Besides the fact that the effort to upgrade
> it to some continued effort at Github (where I failed to find out the
> status - Joshua could you possibly comment on this) was stalled I
> decided to use this one since it seemed to have droped pvm anyway.
>
> The package now builds but the autopkgtest fails:
>
> autopkgtest [09:45:31]: test run-unit-test: [-----------------------
> chmod: cannot access 'alignalign_test': No such file or directory
> chmod: cannot access 'evd_test': No such file or directory
> chmod: cannot access 'masks_test': No such file or directory
> chmod: cannot access 'parsingviterbi_test': No such file or directory
> chmod: cannot access 'tophits_test': No such file or directory
> chmod: cannot access 'trace_test': No such file or directory
> chmod: cannot access 'viterbi_exercise': No such file or directory
> chmod: cannot access 'weeviterbi_test': No such file or directory
> autopkgtest [09:45:31]: test run-unit-test: -----------------------]
> run-unit-test        FAIL non-zero exit status 1
>
> It would be great if someone could have a look here.
>
> Kind regards
>
>        Andreas.
>
> [1] https://lists.debian.org/debian-mentors/2020/08/msg00066.html
>
> --
> http://fam-tille.de
>
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