[Debian-med-packaging] Bug#952597: Two gdcm bugs fixed in Git

[Mathieu Malaterre]

On Mon, Mar 16, 2020 at 3:27 PM Laurent Bigonville <bigon at debian.org> wrote:
>
> On Wed, 11 Mar 2020 00:25:25 +0000 peter green <plugwash at p10link.net> wrote:
>  > > ...
>  > > The following packages have unmet dependencies:
>  > > python3-vtk7 : Depends: python3 (< 3.8) but 3.8.2-1 is to be installed
>  > > Unable to resolve dependencies! Giving up...
>  > > ...
>  > This was a result of the python 3.8 transition, vtk7 has now been
> rebuilt on most architectures (mips is still building) and so it is now
> possible to satisfy the build-dependencies of gdcm.
>  >
>  > I just did a test build, but unfortunately it failed.
>
> There is a new (3.0.5) upstream release, maybe that will help?

Nope. See #954100



>
>  > > cd /gdcm/obj-x86_64-linux-gnu/Utilities/VTK && /usr/bin/cmake -E
> make_directory /gdcm/obj-x86_64-linux-gnu/Utilities/VTK
> /gdcm/obj-x86_64-linux-gnu/Utilities/VTK/CMakeFiles/vtkgdcmsharpglue.dir
> && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig4.0 /usr/bin/swig4.0
> -csharp -namespace vtkgdcm -dllimport vtkgdcmsharpglue -outdir
> /gdcm/obj-x86_64-linux-gnu/Utilities/VTK -c++ -I/usr/include
> -I/usr/include/vtk-7.1 -I/usr/include/freetype2
> -I/usr/include/x86_64-linux-gnu
> -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi
> -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/include/python3.8
> -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp
> -I/usr/include/libxml2 -I/usr/include/tcl
> -I/gdcm/obj-x86_64-linux-gnu/Source/Common -I/gdcm/Source/Common
> -I/gdcm/Source/DataStructureAndEncodingDefinition
> -I/gdcm/Source/MediaStorageAndFileFormat -I/gdcm/Source/DataDictionary
> -I/gdcm/Utilities/VTK -o
> /gdcm/obj-x86_64-linux-gnu/Utilities/VTK/CMakeFiles/vtkgdcmsharpglue.dir/vtkgdcmCSHARP_wrap.cxx
>
>  > > /gdcm/Utilities/VTK/vtkgdcm.i
>  > > /usr/include/vtk-7.1/vtkStringArray.h:36: Warning 402: Base class
> 'vtkAbstractArray' is incomplete.
>  > > /usr/include/vtk-7.1/vtkAlgorithm.h:38: Warning 402: Only forward
> declaration 'vtkAbstractArray' was found.
>  > > /gdcm/Utilities/VTK/vtkgdcm.i:354: Error: A deprecated
> csdestruct_derived typemap was found for vtkGDCMTesting, please remove
> it and replace all csdestruct, csdestruct_derived and csfinalize
> typemaps by the csdispose, csdispose_derived, csdisposing and
> csdisposing_derived typemaps.
>  > > /gdcm/Utilities/VTK/vtkgdcm.i:365: Error: A deprecated
> csdestruct_derived typemap was found for vtkGDCMImageReader, please
> remove it and replace all csdestruct, csdestruct_derived and csfinalize
> typemaps by the csdispose, csdispose_derived, csdisposing and
> csdisposing_derived typemaps.
>  > > /gdcm/Utilities/VTK/vtkgdcm.i:376: Error: A deprecated
> csdestruct_derived typemap was found for vtkGDCMImageWriter, please
> remove it and replace all csdestruct, csdestruct_derived and csfinalize
> typemaps by the csdispose, csdispose_derived, csdisposing and
> csdisposing_derived typemaps.
>  > > ninja: build stopped: subcommand failed.
>  > > dh_auto_build: error: cd obj-x86_64-linux-gnu && LC_ALL=C.UTF-8
> ninja -j1 -v returned exit code 1
>  > > make[1]: *** [debian/rules:110: override_dh_auto_build-arch] Error 25
>  > > make[1]: Leaving directory '/gdcm'
>  > > make: *** [debian/rules:54: build] Error 2
>  >
>  >
>