[Debian-med-packaging] Bug#952597: Two gdcm bugs fixed in Git

[Laurent Bigonville]

On Wed, 11 Mar 2020 00:25:25 +0000 peter green <plugwash at p10link.net> wrote:
 > > ...
 > > The following packages have unmet dependencies:
 > > python3-vtk7 : Depends: python3 (< 3.8) but 3.8.2-1 is to be installed
 > > Unable to resolve dependencies! Giving up...
 > > ...
 > This was a result of the python 3.8 transition, vtk7 has now been 
rebuilt on most architectures (mips is still building) and so it is now 
possible to satisfy the build-dependencies of gdcm.
 >
 > I just did a test build, but unfortunately it failed.

There is a new (3.0.5) upstream release, maybe that will help?


 > > cd /gdcm/obj-x86_64-linux-gnu/Utilities/VTK && /usr/bin/cmake -E 
make_directory /gdcm/obj-x86_64-linux-gnu/Utilities/VTK 
/gdcm/obj-x86_64-linux-gnu/Utilities/VTK/CMakeFiles/vtkgdcmsharpglue.dir 
&& /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig4.0 /usr/bin/swig4.0 
-csharp -namespace vtkgdcm -dllimport vtkgdcmsharpglue -outdir 
/gdcm/obj-x86_64-linux-gnu/Utilities/VTK -c++ -I/usr/include 
-I/usr/include/vtk-7.1 -I/usr/include/freetype2 
-I/usr/include/x86_64-linux-gnu 
-I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi 
-I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/include/python3.8 
-I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp 
-I/usr/include/libxml2 -I/usr/include/tcl 
-I/gdcm/obj-x86_64-linux-gnu/Source/Common -I/gdcm/Source/Common 
-I/gdcm/Source/DataStructureAndEncodingDefinition 
-I/gdcm/Source/MediaStorageAndFileFormat -I/gdcm/Source/DataDictionary 
-I/gdcm/Utilities/VTK -o 
/gdcm/obj-x86_64-linux-gnu/Utilities/VTK/CMakeFiles/vtkgdcmsharpglue.dir/vtkgdcmCSHARP_wrap.cxx 

 > > /gdcm/Utilities/VTK/vtkgdcm.i
 > > /usr/include/vtk-7.1/vtkStringArray.h:36: Warning 402: Base class 
'vtkAbstractArray' is incomplete.
 > > /usr/include/vtk-7.1/vtkAlgorithm.h:38: Warning 402: Only forward 
declaration 'vtkAbstractArray' was found.
 > > /gdcm/Utilities/VTK/vtkgdcm.i:354: Error: A deprecated 
csdestruct_derived typemap was found for vtkGDCMTesting, please remove 
it and replace all csdestruct, csdestruct_derived and csfinalize 
typemaps by the csdispose, csdispose_derived, csdisposing and 
csdisposing_derived typemaps.
 > > /gdcm/Utilities/VTK/vtkgdcm.i:365: Error: A deprecated 
csdestruct_derived typemap was found for vtkGDCMImageReader, please 
remove it and replace all csdestruct, csdestruct_derived and csfinalize 
typemaps by the csdispose, csdispose_derived, csdisposing and 
csdisposing_derived typemaps.
 > > /gdcm/Utilities/VTK/vtkgdcm.i:376: Error: A deprecated 
csdestruct_derived typemap was found for vtkGDCMImageWriter, please 
remove it and replace all csdestruct, csdestruct_derived and csfinalize 
typemaps by the csdispose, csdispose_derived, csdisposing and 
csdisposing_derived typemaps.
 > > ninja: build stopped: subcommand failed.
 > > dh_auto_build: error: cd obj-x86_64-linux-gnu && LC_ALL=C.UTF-8 
ninja -j1 -v returned exit code 1
 > > make[1]: *** [debian/rules:110: override_dh_auto_build-arch] Error 25
 > > make[1]: Leaving directory '/gdcm'
 > > make: *** [debian/rules:54: build] Error 2
 >
 >