[Debian-med-packaging] Bug#955403: bedtools ftbfs, failing tests on armel, armhf, i386, mipsel

[Michael Crusoe]

On Tue, Mar 31, 2020 at 1:19 PM Andreas Tille <tille at debian.org> wrote:

> Hi Michael,
>
> On Tue, Mar 31, 2020 at 11:12:45AM +0200, Matthias Klose wrote:
> > Package: src:bedtools
> > Version: 2.29.2+dfsg-3
> > Severity: serious
> > Tags: sid bullseye
> >
> > bedtools ftbfs, failing tests on armel, armhf, i386, mipsel. All 32bit
> archs?
> >
> > [...]
> > --------------------------
> >  Test Results
> > --------------------------
> > Tools passing:  bamtobed bamtofastq bed12tobed6 bedtobam bigchroms
> closest
> > cluster complement coverage expand fisher flank general genomecov
> getfasta
> > groupby intersect jaccard makewindows map merge multicov reldist shift
> sort
> > spacing split subtract
> > Tools failing:  negativecontrol sample slop
> > NB: the 'negativecontrol' test is supposed to fail. If it wasn't caught,
>
> I wonder whether the most straightforward fix is to drop 32bit archs?
>

I don't think dropping the 32bit archs is urgent right now.
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