[Debian-med-packaging] No resources folder in bbmap package

[Dickey, Aaron - REE-ARS, NE]

Hi Andreas, Here is a reproducible example if you consider it a bug:

#Directory & File not found with package in Debian latest

`apt install bbmap; find / -type d -name 'resources'; find / -type f -name 'adapters.fa' `



#Directory & File found with wget from source

`apt install wget; wget https://sourceforge.net/projects/bbmap/files/latest/download; tar zxvf download; find / -type d -name 'resources'; find / -type f -name 'adapters.fa' `



From: Andreas Tille <andreas at an3as.eu>
Date: Thursday, January 25, 2024 at 10:14 AM
To: Dickey, Aaron - REE-ARS, NE <aaron.dickey at usda.gov>
Cc: bbmap at packages.debian.org <bbmap at packages.debian.org>
Subject: Re: No resources folder in bbmap package
Hi Aaron,

Am Thu, Jan 25, 2024 at 03:02:05PM +0000 schrieb Dickey, Aaron - REE-ARS, NE:
> Hi, I don’t consider it a bug, but why is the ./bbmap/resources/ directory from the original source not included in the package? I’m guessing it is to reduce the package size. -Aaron

For sure it should be considered a bug in a package if a user is missing
some features that are provided by the software.  This was topic of bug
#995406[1] which was closed in bbmap 38.94+dfsg-1 and which should not
occure any more in any later version including the version in Debian
stable[2].

If you have continuous trouble please use

   sudo apt install reportbug
   reportbug bbmap

to give us full version information that is probably needed to
understand the issue.

Moreover some command line which leads to some error we could reproduce
would be helpful.

Kind regards
    Andreas.


[1] https://gcc02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fbugs.debian.org%2F995406&data=05%7C02%7Caaron.dickey%40usda.gov%7C58b123ce4123448fb9b508dc1dc0c324%7Ced5b36e701ee4ebc867ee03cfa0d4697%7C1%7C0%7C638417960944661702%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=5pR9Nl4u5aXQs0%2BQdiEPxtYHVbc10OAg8GBQhK6%2FLis%3D&reserved=0<https://bugs.debian.org/995406>
[2] https://gcc02.safelinks.protection.outlook.com/?url=https%3A%2F%2Ftracker.debian.org%2Fpkg%2Fbbmap&data=05%7C02%7Caaron.dickey%40usda.gov%7C58b123ce4123448fb9b508dc1dc0c324%7Ced5b36e701ee4ebc867ee03cfa0d4697%7C1%7C0%7C638417960944670193%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=NgO2mqxfFdcl%2BoWpY2TGmUSEqe7iAI%2FMLiaDc0v%2FUXQ%3D&reserved=0<https://tracker.debian.org/pkg/bbmap>

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