[Debian-med-packaging] Bug#1072765: python-skbio: FTBFS: dh_sphinxdoc: error: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/js/jquery-fix.js is missing

[Santiago Vila]

Package: src:python-skbio
Version: 0.5.9-4
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:

--------------------------------------------------------------------------------
[...]
  debian/rules binary
dh binary --with sphinxdoc --buildsystem=pybuild
    dh_update_autotools_config -O--buildsystem=pybuild
    dh_autoreconf -O--buildsystem=pybuild
    debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mv simde-sse2.h simde-sse2.h.orig
rm -f skbio/alignment/_ssw_wrapper.c skbio/diversity/_phylogenetic.c skbio/stats/__subsample.c skbio/metadata/_intersection.c
dh_auto_configure
I: pybuild base:311: python3.12 setup.py config
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/skbio/alignment/_ssw_wrapper.pyx
   tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/skbio/diversity/_phylogenetic.pyx
   tree = Parsing.p_module(s, pxd, full_module_name)

[... snipped ...]

copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/blast6_default_single_line -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_seq_too_short -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/legacy9_and_blast7_default -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_long_qual.fastq -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fastq_whitespace_only_lines -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_multi_seq -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_whitespace_only_lines -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_no_data -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/error_diff_ids.fastq -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_metadata_only -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_5_blanks_start_of_file -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/ordination_error4 -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_seq -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/qual_ws_lines_end_of_file -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/fasta_blanks_end_of_file -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/data/stockholm_malformed_data_line -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_base.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_blast6.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_clustal.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_fasta.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_genbank.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_qseq.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_sequence_feature_vocabulary.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/test_taxdump.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/_blast.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/qseq.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/gff3.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/_sequence_feature_vocabulary.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/fasta.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/emptyfile.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/fastq.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/blast6.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/binary_dm.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/genbank.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/newick.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/embl.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/format/ordination.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/util.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/_iosources.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/_exception.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/_warning.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/registry.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/_iosources.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/_fileobject.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/util.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/_warning.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/__pycache__/_exception.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/test_util.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/test_registry.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/test_iosources.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/__pycache__/test_iosources.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/__pycache__/test_registry.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/__pycache__/test_util.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/example_file -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/big5_file.gz -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/real_file -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/big5_file.bz2 -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/real_file_2 -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/example_file.bz2 -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/example_file.gz -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/data/big5_file -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/registry.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/_fileobject.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/io/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/__pycache__/workflow.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/__pycache__/_base.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/tests/__pycache__/test_base.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/tests/__pycache__/test_workflow.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/tests/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/tests/test_base.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/tests/test_workflow.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_interval.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_testing.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_mixin.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_repr.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__pycache__/_testing.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__pycache__/_repr.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__pycache__/_interval.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__pycache__/_mixin.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/test_interval.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/__pycache__/test_intersection.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/__pycache__/test_mixin.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/__pycache__/test_interval.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/test_intersection.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/test_mixin.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/_intersection.cpython-311-x86_64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/metadata/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_phylogenetic.cpython-311-x86_64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/__pycache__/_block.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/__pycache__/_driver.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/__pycache__/_util.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/test_util.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/test_driver.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/__pycache__/test_driver.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/__pycache__/test_util.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/__pycache__/test_block.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/test_block.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_util.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_faith_pd.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_base.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_gini.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_ace.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_lladser.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_faith_pd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_gini.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_chao1.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__pycache__/_base.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_gini.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_lladser.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_faith_pd.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_base.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_ace.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_chao1.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_gini.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_lladser.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__pycache__/test_faith_pd.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_base.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_chao1.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/test_ace.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_ace.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_lladser.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/alpha/_chao1.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_driver.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/_block.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/_unifrac.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/__pycache__/_unifrac.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/__pycache__/test_unifrac.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/data/qiime-191-tt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/test_unifrac.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/diversity/beta/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/workflow.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_repr.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__pycache__/_pairwise.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__pycache__/_repr.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__pycache__/_tabular_msa.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__pycache__/_indexing.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_ssw_wrapper.cpython-311-x86_64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_lib
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_lib/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_lib
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/__pycache__/test_tabular_msa.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/__pycache__/test_ssw.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/__pycache__/test_pairwise.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_ssw.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_tabular_msa.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/tests/test_pairwise.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_tabular_msa.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_indexing.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/_pairwise.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/alignment/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/_testing.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/_misc.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/_exception.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/_warning.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/_testing.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/_decorator.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/_misc.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/_warning.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/__pycache__/_exception.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/test_misc.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/test_testing.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests
creating /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/__pycache__/test_decorator.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/__pycache__/test_misc.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/__pycache__/test_testing.cpython-311-pytest-8.2.2.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/tests/test_decorator.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/_decorator.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_skbio/build/skbio/util/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_dna.py to _dna.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_nucleotide_mixin.py to _nucleotide_mixin.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_repr.py to _repr.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_nucleotide_sequences.py to test_nucleotide_sequences.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_sequence.py to test_sequence.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_genetic_code.py to test_genetic_code.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_grammared_sequence.py to test_grammared_sequence.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_dna.py to test_dna.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_distance.py to test_distance.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_rna.py to test_rna.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/test_protein.py to test_protein.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_rna.py to _rna.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_sequence.py to _sequence.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_protein.py to _protein.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/distance.py to distance.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_grammared_sequence.py to _grammared_sequence.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/_genetic_code.py to _genetic_code.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/sequence/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/_base.py to _base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/test.py to test.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/composition.py to composition.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/gradient.py to gradient.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/tests/test_hommola.py to test_hommola.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/_hommola.py to _hommola.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/evolve/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/_misc.py to _misc.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/_subsample.py to _subsample.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/test_power.py to test_power.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/test_misc.py to test_misc.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/test_composition.py to test_composition.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/test_subsample.py to test_subsample.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/test_gradient.py to test_gradient.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_permdisp.py to _permdisp.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_utils.py to _utils.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_mantel.py to _mantel.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_base.py to _base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_permanova.py to _permanova.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_anosim.py to _anosim.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_base.py to test_base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_permanova.py to test_permanova.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_permdisp.py to test_permdisp.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_anosim.py to test_anosim.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_bioenv.py to test_bioenv.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/tests/test_mantel.py to test_mantel.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/_bioenv.py to _bioenv.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/distance/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_utils.py to _utils.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_principal_coordinate_analysis.py to _principal_coordinate_analysis.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_util.py to test_util.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_redundancy_analysis.py to test_redundancy_analysis.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_correspondence_analysis.py to test_correspondence_analysis.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py to test_canonical_correspondence_analysis.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py to test_principal_coordinate_analysis.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/tests/test_ordination_results.py to test_ordination_results.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_ordination_results.py to _ordination_results.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_redundancy_analysis.py to _redundancy_analysis.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_correspondence_analysis.py to _correspondence_analysis.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/ordination/_canonical_correspondence_analysis.py to _canonical_correspondence_analysis.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/stats/power.py to power.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/_tree.py to _tree.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/_exception.py to _exception.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/_majority_rule.py to _majority_rule.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/test_tree.py to test_tree.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/test_majority_rule.py to test_majority_rule.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/tests/test_nj.py to test_nj.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/_nj.py to _nj.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tree/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/clustal.py to clustal.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/phylip.py to phylip.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/_base.py to _base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/blast7.py to blast7.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/lsmat.py to lsmat.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/stockholm.py to stockholm.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/taxdump.py to taxdump.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_fastq.py to test_fastq.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_ordination.py to test_ordination.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_binary_dm.py to test_binary_dm.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_emptyfile.py to test_emptyfile.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_newick.py to test_newick.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_embl.py to test_embl.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_phylip.py to test_phylip.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_blast7.py to test_blast7.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_stockholm.py to test_stockholm.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_lsmat.py to test_lsmat.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_gff3.py to test_gff3.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_base.py to test_base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_blast6.py to test_blast6.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_clustal.py to test_clustal.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_fasta.py to test_fasta.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_genbank.py to test_genbank.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_qseq.py to test_qseq.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_sequence_feature_vocabulary.py to test_sequence_feature_vocabulary.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/test_taxdump.py to test_taxdump.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/_blast.py to _blast.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/qseq.py to qseq.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/gff3.py to gff3.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/_sequence_feature_vocabulary.py to _sequence_feature_vocabulary.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/fasta.py to fasta.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/emptyfile.py to emptyfile.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/fastq.py to fastq.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/blast6.py to blast6.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/binary_dm.py to binary_dm.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/genbank.py to genbank.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/newick.py to newick.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/embl.py to embl.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/format/ordination.py to ordination.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/util.py to util.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/_iosources.py to _iosources.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/_exception.py to _exception.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/_warning.py to _warning.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/test_util.py to test_util.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/test_registry.py to test_registry.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/test_iosources.py to test_iosources.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/registry.py to registry.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/_fileobject.py to _fileobject.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/io/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/test_base.py to test_base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/test_workflow.py to test_workflow.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/_interval.py to _interval.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/_testing.py to _testing.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/_mixin.py to _mixin.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/_repr.py to _repr.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/test_interval.py to test_interval.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/test_intersection.py to test_intersection.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/test_mixin.py to test_mixin.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/metadata/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/test_util.py to test_util.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/test_driver.py to test_driver.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/test_block.py to test_block.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/_util.py to _util.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_faith_pd.py to _faith_pd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_base.py to _base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_gini.py to _gini.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_gini.py to test_gini.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_lladser.py to test_lladser.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_faith_pd.py to test_faith_pd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_base.py to test_base.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_chao1.py to test_chao1.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/test_ace.py to test_ace.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_ace.py to _ace.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_lladser.py to _lladser.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/alpha/_chao1.py to _chao1.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/_driver.py to _driver.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/_block.py to _block.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/_unifrac.py to _unifrac.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/test_unifrac.py to test_unifrac.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/diversity/beta/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/workflow.py to workflow.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_repr.py to _repr.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_lib/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/test_ssw.py to test_ssw.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/test_tabular_msa.py to test_tabular_msa.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/tests/test_pairwise.py to test_pairwise.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_tabular_msa.py to _tabular_msa.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_indexing.py to _indexing.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/_pairwise.py to _pairwise.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/alignment/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/_testing.py to _testing.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/_misc.py to _misc.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/_exception.py to _exception.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/_warning.py to _warning.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/test_misc.py to test_misc.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/test_testing.py to test_testing.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/tests/test_decorator.py to test_decorator.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/_decorator.py to _decorator.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/skbio/util/__init__.py to __init__.cpython-311.pyc
running install_egg_info
running egg_info
writing scikit_bio.egg-info/PKG-INFO
writing dependency_links to scikit_bio.egg-info/dependency_links.txt
writing requirements to scikit_bio.egg-info/requires.txt
writing top-level names to scikit_bio.egg-info/top_level.txt
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
reading manifest file 'scikit_bio.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'simde-sse2.h'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
warning: no previously-included files matching '.coverage' found anywhere in distribution
adding license file 'LICENSE.txt'
writing manifest file 'scikit_bio.egg-info/SOURCES.txt'
Copying scikit_bio.egg-info to /<<PKGBUILDDIR>>/debian/python3-skbio/usr/lib/python3.11/dist-packages/scikit_bio-0.5.9.egg-info
Skipping SOURCES.txt
running install_scripts
    dh_install -O--buildsystem=pybuild
    dh_installdocs -O--buildsystem=pybuild
    debian/rules override_dh_sphinxdoc
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_link --package=python-skbio-doc \
	/usr/share/javascript/mathjax/MathJax.js \
	/usr/share/doc/python-skbio-doc/html/_static/MathJax.js
dh_sphinxdoc --package=python-skbio-doc
dh_sphinxdoc: error: debian/python-skbio-doc/usr/share/doc/python-skbio-doc/html/_static/js/jquery-fix.js is missing
make[1]: *** [debian/rules:57: override_dh_sphinxdoc] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:15: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------

The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202406/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.