[Debian-med-packaging] Bug#1088316: augur: autopkgtest failure with Python 3.13

[Graham Inggs]

Source: augur
Version: 24.4.0-1
Severity: serious
User: debian-python at lists.debian.org
Usertags: python3.13

Hi Maintainer

The autopkgtests of this package fail with Python 3.13 [1].  I've
copied what I hope is the relevant part of the log below.

Regards
Graham


[1] https://ci.debian.net/packages/a/augur/testing/amd64/


137s ==================================== ERRORS
====================================
137s _____________ ERROR collecting tests/dates/test_ambiguous_date.py
______________
137s ImportError while importing test module
'/tmp/autopkgtest-lxc.1a70hxg9/downtmp/build.S9M/src/tests/dates/test_ambiguous_date.py'.
137s Hint: make sure your test modules/packages have valid Python names.
137s Traceback:
137s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
137s return _bootstrap._gcd_import(name[level:], package, level)
137s tests/dates/test_ambiguous_date.py:3: in <module>
137s from augur.dates import ambiguous_date
137s augur/__init__.py:15: in <module>
137s from .io.print import print_err
137s augur/io/__init__.py:6: in <module>
137s from .metadata import read_metadata # noqa: F401
137s augur/io/metadata.py:5: in <module>
137s import pyfastx
137s E ModuleNotFoundError: No module named 'pyfastx'