[Debian-med-packaging] Bug#1139623: insighttoolkit5: FTBFS against HDF5 2.1.0

Gilles Filippini pini at debian.org
Wed Jun 10 11:01:58 BST 2026


Source: insighttoolkit5
Version: 5.4.6-1
Severity: important
Tags: ftbfs patch

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Hi,

During a test rebuild of HDF5's reverse dependencies against HDF5 2.1.0
currently in experimental, insighttoolkit5 FTBFS because its build
toolchain doesn't support this new major release.

The attached patch is a workaround for this issue and supports both
HDF5 1.14.6 in unstable and HDF5 2.1.0 in experimental.

Best,
_g.


- -- System Information:
Debian Release: 12.0
Architecture: amd64 (x86_64)

Kernel: Linux 6.1.0-44-amd64 (SMP w/12 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

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diff -Nru insighttoolkit5-5.4.6/debian/changelog insighttoolkit5-5.4.6/debian/changelog
--- insighttoolkit5-5.4.6/debian/changelog	2026-05-09 22:03:42.000000000 +0200
+++ insighttoolkit5-5.4.6/debian/changelog	2026-06-07 18:50:21.000000000 +0200
@@ -1,3 +1,10 @@
+insighttoolkit5 (5.4.6-1.1) UNRELEASED; urgency=medium
+
+  * Non-maintainer upload.
+  * Fix FTBFS against HDF5 2.1.0
+
+ -- Gilles Filippini <pini at debian.org>  Sun, 07 Jun 2026 18:50:21 +0200
+
 insighttoolkit5 (5.4.6-1) unstable; urgency=medium
 
   [ Steve Robbins ]
diff -Nru insighttoolkit5-5.4.6/debian/rules insighttoolkit5-5.4.6/debian/rules
--- insighttoolkit5-5.4.6/debian/rules	2026-05-09 22:03:42.000000000 +0200
+++ insighttoolkit5-5.4.6/debian/rules	2026-06-07 18:50:10.000000000 +0200
@@ -43,6 +43,7 @@
 	-DGTEST_SRC=/usr/src/googletest/googletest \
 	-DITK_USE_SYSTEM_MINC:BOOL=ON \
 	-DITK_USE_SYSTEM_HDF5:BOOL=ON \
+	-DHDF5_ROOT=/usr/lib/$(DEB_HOST_MULTIARCH)/hdf5/serial \
 	-DITK_USE_SYSTEM_JPEG:BOOL=ON \
 	-DITK_USE_SYSTEM_PNG:BOOL=ON \
 	-DITK_USE_SYSTEM_TIFF:BOOL=OFF \


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