[Debian-pan-maintainers] Bug#1003061: dmrgpp: autopkgtest failure on armhf: segmentation fault
Paul Gevers
elbrus at debian.org
Mon Jan 3 14:54:25 GMT 2022
Source: dmrgpp
Version: 6.02-2
X-Debbugs-CC: debian-ci at lists.debian.org
Severity: serious
User: debian-ci at lists.debian.org
Usertags: fails-always timeout
Dear maintainer(s),
You recently added an autopkgtest to your package dmrgpp, great.
However, it fails. Currently this failure is blocking the migration to
testing [1]. Can you please investigate the situation and fix it?
I copied some of the output at the bottom of this report. Apperently the
crash also doesn't stop the test, as it times out after 2:47h.
More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul
[1] https://qa.debian.org/excuses.php?package=dmrgpp
https://ci.debian.net/data/autopkgtest/testing/armhf/d/dmrgpp/17804986/log.gz
Cloning into 'OraclesDmrg'...
From https://code.ornl.gov/gonzalo_3/OraclesDmrg
* branch features -> FETCH_HEAD
Already up to date.
'../src/dmrg' -> 'tests/dmrg'
'../src/observe' -> 'tests/observe'
./ci.pl: WARNING: Ignored test 0 because it's an SU(2) test and you did
not specify -su2
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./ci.pl: Submitted Batch2.pbs Batch2.pbs
|2| has 1 observe lines
|2|: postTest ./observe -f ../inputs/input2.ain
"<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe2.txt
|29| has 1 dmrg lines
|50| has 1 dmrg lines
|50| has 1 getTimeObservablesInSitu lines
|52| has 1 dmrg lines
|52| has 2 getTimeObservablesInSitu lines
|61| has 1 observe lines
|61|: postTest ./observe -f ../inputs/input61.inp "<Q0|c?0';c?1'|Q1>"
>> observe61.txt
|63| has 1 dmrg lines
|63| has 1 CollectBrakets lines
|106| has 1 dmrg lines
|106| has 1 CollectBrakets lines
|112| has 1 observe lines
|112|: postTest ./observe -f ../inputs/input112.inp
"<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe112.txt
|113| has 1 observe lines
|113|: postTest ./observe -f ../inputs/input113.inp
"<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe113.txt
|121| has 1 dmrg lines
|121| has 1 CollectBrakets lines
|127| has 1 dmrg lines
|127| has 1 CollectBrakets lines
|150| has 1 observe lines
|150|: postTest ./observe -f ../inputs/input150.inp
"<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe150.txt
|250| has 1 dmrg lines
|363| has 1 observe lines
|363|: postTest ./observe -f ../inputs/input363.inp
"<gs|c?0'*c?0|gs>,<gs|c?0'*c?1|gs>,<gs|c?0'*c?2|gs>,<gs|c?0'*c?3|gs>,<gs|c?1'*c?1|gs>,<gs|c?1'*c?2|gs>,<gs|c?1'*c?3|gs>,<gs|c?2'*c?2|gs>,<gs|c?2'*c?3|gs>,<gs|c?3'*c?3|gs>,ss"
>> observe363.txt
|467| has 1 observe lines
|467|: postTest ./observe -f ../inputs/input467.inp
"<gs|c?0'*c?0|gs>,<gs|c?0'*c?1|gs>,<gs|c?1'*c?1|gs>,ss" >> observe467.txt
|1500| has 1 dmrg lines
|1500| has 2 metts lines
|1801| has 3 getEnergyAncilla lines
|1811| has 3 getEnergyAncilla lines
|1851| has 3 getEnergyAncilla lines
|1861| has 3 getEnergyAncilla lines
|1951| has 3 getEnergyAncilla lines
|2102| has 1 dmrg lines
|2102| has 1 CollectBrakets lines
|2300| has 1 observe lines
|2300|: postTest ./observe -f ../inputs/input2300.inp
"<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe2300.txt
|3511| has 1 dmrg lines
|3511| has 1 procOmegas lines
|3512| has 1 dmrg lines
|3512| has 1 procOmegas lines
|3532| has 1 dmrg lines
|3532| has 1 procOmegas lines
|4300| has 2 observe lines
|4300|: postTest ./observe -f ../inputs/input4300.inp
ss,'<gs|:../inputs/sz4300.txt[1];:../inputs/sz4300.txt[3];:../inputs/sz4300.txt[6];:../inputs/sz4300.txt[7]|gs>'
>> observe4300.txt
|4300|: postTest ./observe -f ../inputs/input4300.inp
'<gs|:../inputs/sz4300.txt[1];:../inputs/sz4300.txt[3];:../inputs/sz4300.txt[6]|gs>'
>> observe4300.txt
|4601| has 1 dmrg lines
|4601| has 1 CollectBrakets lines
|4800| has 1 observe lines
|4800|: postTest ./observe -f ../inputs/input4800.inp
"<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe4800.txt
|4808| has 1 observe lines
|4808|: postTest ./observe -f ../inputs/input4808.inp
"<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe4808.txt
|5500| has 1 dmrg lines
|5501| has 1 dmrg lines
|5501| has 1 CollectBrakets lines
|5502| has 1 dmrg lines
|5502| has 1 CollectBrakets lines
|5503| has 1 dmrg lines
|5503| has 1 CollectBrakets lines
|5504| has 1 dmrg lines
|5504| has 1 CollectBrakets lines
|5600| has 1 observe lines
|5600|: postTest ./observe -f ../inputs/input5600.inp "<gs|n|gs>" >>
observe5600.txt
|5600| has 1 nDollar lines
|5601| has 1 dmrg lines
|5802| has 1 observe lines
|5802|: postTest ./observe -f ../inputs/input5802.inp
"<gs|:../inputs/AThreeHalvesOneHalfDagger_AOneHalfOneHalf.txt|gs>" >>
observe5802.txt
|6005| has 1 dmrg lines
|6005| has 1 CollectBrakets lines
|6005| has 1 observe lines
|6005|: postTest ./observe -f ../inputs/input6005.inp "<gs|sy?0|gs>" >>
observe6005.txt
|6700| has 1 observe lines
|6700|: postTest ./observe -f ../inputs/input6700.ain
"<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe6700.txt
Engine/ObserverHelper.h read 0 out of 14
Engine/ObserverHelper.h read 1 out of 14
Engine/ObserverHelper.h read 2 out of 14
Engine/ObserverHelper.h read 3 out of 14
Engine/ObserverHelper.h read 4 out of 14
Engine/ObserverHelper.h read 5 out of 14
Engine/ObserverHelper.h read 6 out of 14
Engine/ObserverHelper.h read 7 out of 14
Engine/ObserverHelper.h read 8 out of 14
Engine/ObserverHelper.h read 9 out of 14
Engine/ObserverHelper.h read 10 out of 14
Engine/ObserverHelper.h read 11 out of 14
Engine/ObserverHelper.h read 12 out of 14
Engine/ObserverHelper.h read 13 out of 14
./ci.pl: Submitted Batch3.pbs Batch3.pbs
Batch3.pbs: line 9: 2907 Segmentation fault ./dmrg -f
../inputs/input3.ain &> output3.txt
./ci.pl: Submitted Batch4.pbs Batch4.pbs
autopkgtest [09:11:32]: ERROR: timed out on command "su -s /bin/bash
debci -c set -e; export USER=`id -nu`; . /etc/profile >/dev/null 2>&1 ||
true; . ~/.profile >/dev/null 2>&1 || true;
buildtree="/tmp/autopkgtest-lxc.kj65fnub/downtmp/build.XtW/src"; mkdir
-p -m 1777 --
"/tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-artifacts"; export
AUTOPKGTEST_ARTIFACTS="/tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-artifacts";
export ADT_ARTIFACTS="$AUTOPKGTEST_ARTIFACTS"; mkdir -p -m 755
"/tmp/autopkgtest-lxc.kj65fnub/downtmp/autopkgtest_tmp"; export
AUTOPKGTEST_TMP="/tmp/autopkgtest-lxc.kj65fnub/downtmp/autopkgtest_tmp";
export ADTTMP="$AUTOPKGTEST_TMP"; export DEBIAN_FRONTEND=noninteractive;
export LANG=C.UTF-8; export DEB_BUILD_OPTIONS=parallel=160; unset
LANGUAGE LC_CTYPE LC_NUMERIC LC_TIME LC_COLLATE LC_MONETARY
LC_MESSAGES LC_PAPER LC_NAME LC_ADDRESS LC_TELEPHONE LC_MEASUREMENT
LC_IDENTIFICATION LC_ALL;rm -f /tmp/autopkgtest_script_pid; set -C; echo
$$ > /tmp/autopkgtest_script_pid; set +C; trap "rm -f
/tmp/autopkgtest_script_pid" EXIT INT QUIT PIPE; cd "$buildtree"; touch
/tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-stdout
/tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-stderr; bash -ec 'set
-efu ; cp -rf scripts TestSuite "$AUTOPKGTEST_TMP" ; cd
"$AUTOPKGTEST_TMP" ; mkdir -p src ; cp -f /usr/bin/dmrg `find /usr/lib
-name observe -type f` src ; git clone
https://code.ornl.gov/gonzalo_3/OraclesDmrg.git ; cd
"$AUTOPKGTEST_TMP"/OraclesDmrg ; git pull origin features ; cd
"$AUTOPKGTEST_TMP"/TestSuite ; rm -Rf tests/ ; cp -f
batchDollarized.pbs.sample batchDollarized.pbs ; ./ci.pl -n "0-*" -S
bash ; ./postCi.pl -g "$AUTOPKGTEST_TMP"/OraclesDmrg/oracles/tests -n
'\''0-*'\''' 2> >(tee -a
/tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-stderr >&2) > >(tee -a
/tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-stdout);" (kind: test)
autopkgtest [09:11:32]: test command1
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