[Debian-pan-maintainers] Bug#1044718: dioptas: Fails to build source after successful build

[Lucas Nussbaum]

Source: dioptas
Version: 0.5.2-4
Severity: minor
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: debian-qa at lists.debian.org
Usertags: qa-doublebuild

Hi,

This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).

This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.

More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild

Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S
> ---------------------------------------------------------------------------------------------------------------------
> 
> dpkg-buildpackage: info: source package dioptas
> dpkg-buildpackage: info: source version 0.5.2-4
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Roland Mas <lolando at debian.org>
>  dpkg-source --before-build .
>  fakeroot debian/rules clean
> dh clean --with python3 --buildsystem=pybuild
>    debian/rules override_dh_auto_clean
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_auto_clean
> I: pybuild base:275: python3.11 setup.py clean 
> /<<PKGBUILDDIR>>/setup.py:3: DeprecationWarning: 
> 
>   `numpy.distutils` is deprecated since NumPy 1.23.0, as a result
>   of the deprecation of `distutils` itself. It will be removed for
>   Python >= 3.12. For older Python versions it will remain present.
>   It is recommended to use `setuptools < 60.0` for those Python versions.
>   For more details, see:
>     https://numpy.org/devdocs/reference/distutils_status_migration.html 
> 
> 
>   from numpy.distutils.core import Extension, setup
> /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar.
>   if not hasattr(numpy, method):
> /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar.
>   obj = getattr(themodule, elem)
> running clean
> removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_dioptas/build' (and everything under it)
> 'build/bdist.linux-x86_64' does not exist -- can't clean it
> 'build/scripts.linux-x86_64-3.11' does not exist -- can't clean it
> rm -f dioptas/model/util/smooth_bruckner_cython.c
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
>    dh_autoreconf_clean -O--buildsystem=pybuild
>    dh_clean -O--buildsystem=pybuild
>  dpkg-source -b .
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building dioptas using existing ./dioptas_0.5.2.orig.tar.gz
> dpkg-source: info: using patch list from debian/patches/series
> dpkg-source: warning: file dioptas-0.5.2/dioptas.egg-info/SOURCES.txt has no final newline (either original or modified version)
> dpkg-source: error: cannot represent change to docs/build/doctrees/calibration.doctree: binary file contents changed
> dpkg-source: error: add docs/build/doctrees/calibration.doctree in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/doctrees/configurations_and_projects.doctree: binary file contents changed
> dpkg-source: error: add docs/build/doctrees/configurations_and_projects.doctree in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/doctrees/environment.pickle: binary file contents changed
> dpkg-source: error: add docs/build/doctrees/environment.pickle in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/doctrees/index.doctree: binary file contents changed
> dpkg-source: error: add docs/build/doctrees/index.doctree in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/doctrees/integration.doctree: binary file contents changed
> dpkg-source: error: add docs/build/doctrees/integration.doctree in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/doctrees/introduction.doctree: binary file contents changed
> dpkg-source: error: add docs/build/doctrees/introduction.doctree in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/doctrees/mask.doctree: binary file contents changed
> dpkg-source: error: add docs/build/doctrees/mask.doctree in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/background_control.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/background_control.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/background_inspect.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/background_inspect.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/cor_control.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/cor_control.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/erase_icon.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/erase_icon.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/image_widget_qa.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/image_widget_qa.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/integration_options.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/integration_options.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/integration_view.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/integration_view.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/integration_view_configuration.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/integration_view_configuration.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/integration_view_modules.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/integration_view_modules.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/integration_view_project_controls.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/integration_view_project_controls.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/jcpds_editor.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/jcpds_editor.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/mask_view.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/mask_view.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/open_icon.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/open_icon.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/overlay_control.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/overlay_control.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/peak_selection.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/peak_selection.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/peak_selection2.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/peak_selection2.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/phase_control.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/phase_control.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/refinement_options.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/refinement_options.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/save_icon.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/save_icon.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_images/start_values.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_images/start_values.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/_sources/index.rst.txt has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/_sources/introduction.rst.txt has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/_static/agogo.css has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/_static/basic.css has no final newline (either original or modified version)
> dpkg-source: error: cannot represent change to docs/build/html/_static/bgfooter.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_static/bgfooter.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_static/bgtop.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_static/bgtop.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/_static/documentation_options.js has no final newline (either original or modified version)
> dpkg-source: error: cannot represent change to docs/build/html/_static/file.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_static/file.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_static/minus.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_static/minus.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to docs/build/html/_static/plus.png: binary file contents changed
> dpkg-source: error: add docs/build/html/_static/plus.png in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/_static/pygments.css has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/calibration.html has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/configurations_and_projects.html has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/genindex.html has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/index.html has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/integration.html has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/introduction.html has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/mask.html has no final newline (either original or modified version)
> dpkg-source: error: cannot represent change to docs/build/html/objects.inv: binary file contents changed
> dpkg-source: error: add docs/build/html/objects.inv in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/search.html has no final newline (either original or modified version)
> dpkg-source: warning: file dioptas-0.5.2/docs/build/html/searchindex.js has no final newline (either original or modified version)
> dpkg-source: error: unrepresentable changes to source
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 1
> 
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S' failed to run.


The full build log is available from:
http://qa-logs.debian.net/2023/08/13/dioptas_0.5.2-4_unstable.log

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.