Bug#1071722: adios4dolfinx: FTBFS: failing tests

Santiago Vila sanvila at debian.org
Sun May 26 11:44:38 BST 2024


>> In such bug I proposed to run mpi with true and skip
>> the tests if it fails.
>>
>> https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1057556#34
>>
>> Maybe a similar idea would work here as well.
> 
> 
> We can try that. As you suggested in the other bug, it might be quirk of openmpi we're facing.
> openmpi distinguishs sockets, cores, slots, hwthread.  On one system two cores might be found in one socket, on another each core might have its own socket.
> 
> To track that, what does `lscpu` report on your failing system?
> (the thread,core,socket lines are probably the relevant ones)

It's an AWS machine of type m6a.large. These are the most relevant specs.

     Thread(s) per core:   2
     Core(s) per socket:   1
     Socket(s):            1

(full lscpu attached in case it matters)

So it seems to have "one core, two threads". I can try changing the n=2 parameter
in the ipp.Cluster invocation to n=1 and tell you if there is any change,
if it helps. I don't think that will make things worse in any case.

Thanks.
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Architecture:                         x86_64
CPU op-mode(s):                       32-bit, 64-bit
Address sizes:                        48 bits physical, 48 bits virtual
Byte Order:                           Little Endian
CPU(s):                               2
On-line CPU(s) list:                  0,1
Vendor ID:                            AuthenticAMD
BIOS Vendor ID:                       Advanced Micro Devices, Inc.
Model name:                           AMD EPYC 7R13 Processor
BIOS Model name:                      AMD EPYC 7R13 Processor  CPU @ 2.6GHz
BIOS CPU family:                      107
CPU family:                           25
Model:                                1
Thread(s) per core:                   2
Core(s) per socket:                   1
Socket(s):                            1
Stepping:                             1
BogoMIPS:                             5299,99
Flags:                                fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl nonstop_tsc cpuid extd_apicid aperfmperf tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm cmp_legacy cr8_legacy abm sse4a misalignsse 3dnowprefetch topoext invpcid_single ssbd ibrs ibpb stibp vmmcall fsgsbase bmi1 avx2 smep bmi2 invpcid rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 clzero xsaveerptr rdpru wbnoinvd arat npt nrip_save vaes vpclmulqdq rdpid
Hypervisor vendor:                    KVM
Virtualization type:                  full
L1d cache:                            32 KiB (1 instance)
L1i cache:                            32 KiB (1 instance)
L2 cache:                             512 KiB (1 instance)
L3 cache:                             4 MiB (1 instance)
NUMA node(s):                         1
NUMA node0 CPU(s):                    0,1
Vulnerability Gather data sampling:   Not affected
Vulnerability Itlb multihit:          Not affected
Vulnerability L1tf:                   Not affected
Vulnerability Mds:                    Not affected
Vulnerability Meltdown:               Not affected
Vulnerability Mmio stale data:        Not affected
Vulnerability Reg file data sampling: Not affected
Vulnerability Retbleed:               Not affected
Vulnerability Spec rstack overflow:   Mitigation; safe RET, no microcode
Vulnerability Spec store bypass:      Mitigation; Speculative Store Bypass disabled via prctl
Vulnerability Spectre v1:             Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:             Mitigation; Retpolines; IBPB conditional; IBRS_FW; STIBP always-on; RSB filling; PBRSB-eIBRS Not affected; BHI Not affected
Vulnerability Srbds:                  Not affected
Vulnerability Tsx async abort:        Not affected


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