[Debian-science-sagemath] Sage 8.0

Tobias Hansen thansen at debian.org
Sat Jun 17 11:13:07 UTC 2017


With all the new packages in order the only major problem now is a
segfault during the doc build:

[dochtml] Done building the documentation!
[dochtml]
------------------------------------------------------------------------
[dochtml]
/usr/lib/python2.7/dist-packages/cysignals/signals.x86_64-linux-gnu.so(+0x4e77)[0x7fb1c8788e77]
[dochtml]
/usr/lib/python2.7/dist-packages/cysignals/signals.x86_64-linux-gnu.so(+0x5a05)[0x7fb1c8789a05]
[dochtml]
/usr/lib/python2.7/dist-packages/cysignals/signals.x86_64-linux-gnu.so(+0x8057)[0x7fb1c878c057]
[dochtml] /lib/x86_64-linux-gnu/libpthread.so.0(+0x110c0)[0x7fb1cdf3e0c0]
[dochtml] python(PyErr_Fetch+0xa)[0x55fbc80988da]
[dochtml]
/home/thansen/src/sage/sagemath/sagemath/debian/build/usr/lib/python2.7/dist-packages/sage/rings/number_field/number_field_element_quadratic.so(+0x8a0f)[0x7fb0b5a36a0f]
[dochtml]
/usr/lib/x86_64-linux-gnu/libpynac.so.13(+0x169451)[0x7fb09bb3f451]
[dochtml] /lib/x86_64-linux-gnu/libc.so.6(+0x35910)[0x7fb1cd29e910]
[dochtml] /lib/x86_64-linux-gnu/libc.so.6(+0x3596a)[0x7fb1cd29e96a]
[dochtml]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf8)[0x7fb1cd2892b8]
[dochtml] python(_start+0x2a)[0x55fbc806031a]
[dochtml]
------------------------------------------------------------------------
[dochtml] Attaching gdb to process id 6055.
[dochtml]
[dochtml] Saved trace to
/home/thansen/src/sage/sagemath/sagemath/debian/test/crash_logs/crash_tq1JYo.log
[dochtml]
------------------------------------------------------------------------
[dochtml] Unhandled SIGSEGV: A segmentation fault occurred.
[dochtml] This probably occurred because a *compiled* module has a bug
[dochtml] in it and is not properly wrapped with sig_on(), sig_off().
[dochtml] Python will now terminate.

The crash log file is empty.

Nothing segfaults during doctesting though:

sage -t --long src/sage/plot/plot.py  # 1 doctest failed
sage -t --long src/sage/tests/cmdline.py  # 6 doctests failed
sage -t --long src/sage/tests/gosper-sum.py  # 1 doctest failed
sage -t --long src/sage/plot/arrow.py  # 1 doctest failed
sage -t --long src/sage/functions/orthogonal_polys.py  # 1 doctest failed
sage -t --long src/sage/libs/pynac/pynac.pxd  # 1 doctest failed
sage -t --long src/sage/numerical/optimize.py  # 5 doctests failed
sage -t --long src/sage/libs/pari/tests.py  # 2 doctests failed
sage -t --long src/sage/probability/probability_distribution.pyx  # 1
doctest failed
sage -t --long src/sage/geometry/polyhedron/backend_cdd.py  # 1 doctest
failed
sage -t --long src/sage/repl/rich_output/backend_ipython.py  # 1 doctest
failed
sage -t --long src/sage/tests/cython.pyx  # 1 doctest failed
sage -t --long src/sage_setup/find.py  # 2 doctests failed
sage -t --long /usr/lib/python2.7/dist-packages/sagenb/notebook/misc.py 
# 2 doctests failed
sage -t --long src/sage/numerical/backends/glpk_backend.pyx  # 1 doctest
failed

Best,
Tobias

On 06/16/2017 08:37 AM, Jerome BENOIT wrote:
>
> I have just pushed the update to Alioth as experimental package.
> Once fplll-5.1.0-1 reaches experimental, I will upload it.
>
> Cheers,
> Jerome
>




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