[Debichem-devel] Bug#703782: Bug#703782: pymol: Unable to launch the Menu

lina lina.oahz at gmail.com
Mon Mar 25 04:00:48 UTC 2013


On Monday 25,March,2013 03:25 AM, Michael Banck wrote:
> tags 703782 +unreproducible
> thanks
> 
> Hi,
> 
> On Sun, Mar 24, 2013 at 01:06:24PM +0100, Michael Banck wrote:
>> On Sun, Mar 24, 2013 at 12:06:06AM +0800, lina wrote:
>>> Package: pymol
>>> Version: 1.5.0.1-2
>>> Severity: normal
>>>
>>> Dear Maintainer,
>>>     
>>>     Traceback (most recent call last):
>>>       File "/usr/lib/python2.7/dist-packages/pymol/__init__.py", line 452, in launch_gui
>>>           sys.modules[self.invocation.options.gui].__init__(self,poll,skin)
>>>           TypeError: module.__init__() takes at most 2 arguments (3 given)
>>>
>>>      
>>>      I can only launch the PyMOL Viewer.
>>
>> Can you explain a bit more what the problem is?  How do you start pymol,
>> via the command-line?  
>>
>> Is the problem, that the viewer window ("PyMOL Viewer") appears, but the
>> (detached) window with the menus ("File", "Edit" etc.) called "The PyMOL
>> Molecular Graphics System" does not?  I can not immediately reproduce
>> this here.
> 
> I upgraded my notebook to current testing and I still cannot reproduce
> this.  The corresponding __init__ line in
> /usr/lib/python2.7/dist-packages/pmg_tk/PMGApp.py is as follows:
> 
>     def __init__(self, pymol_instance, skin):
> 
> Did you install some local python packages and/or PyMOL itself locally?

No. I don't think so, except the svn-version pymol I installed
yesterday. It is separated.

> What is the output of "ls /usr/local/lib/python2.7/*"?

ls /usr/local/lib/python2.7/*
/usr/local/lib/python2.7/dist-packages:
easy-install.pth
pandas-0.7.3-py2.7-linux-x86_64.egg
pymol-1.4.0.egg-info
pytz-2013b-py2.7.egg
QSTK-0.2.5-py2.7.egg
scikit_learn-0.13.1-py2.7-linux-x86_64.egg
scikits.statsmodels-0.3.1-py2.7.egg
web

/usr/local/lib/python2.7/site-packages:



> 
> 
> Michael



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