[Debichem-devel] Bug#759974: votca-csg: FTBFS: Could NOT find GROMACS (missing: GROMACS_LIBRARY GROMACS_INCLUDE_DIR)

[Lucas Nussbaum]

Source: votca-csg
Version: 1.2.3-1
Severity: serious
Tags: jessie sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20140830 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part (hopefully):
> make[1]: Entering directory '/«PKGBUILDDIR»'
> dh_auto_configure -- -DLIB=lib/x86_64-linux-gnu
> -- The C compiler identification is GNU 4.9.1
> -- The CXX compiler identification is GNU 4.9.1
> -- Check for working C compiler: /usr/bin/cc
> -- Check for working C compiler: /usr/bin/cc -- works
> -- Detecting C compiler ABI info
> -- Detecting C compiler ABI info - done
> -- Check for working CXX compiler: /usr/bin/c++
> -- Check for working CXX compiler: /usr/bin/c++ -- works
> -- Detecting CXX compiler ABI info
> -- Detecting CXX compiler ABI info - done
> -- Found TXT2TAGS: /usr/bin/txt2tags  
> -- Boost version: 1.55.0
> -- Found the following Boost libraries:
> --   program_options
> CMake Warning (dev) at CMakeLists.txt:70 (find_package):
>   Syntax Warning in cmake code at
> 
>     /«PKGBUILDDIR»/CMakeModules/FindVOTCA_TOOLS.cmake:57:497
> 
>   Argument not separated from preceding token by whitespace.
> This warning is for project developers.  Use -Wno-dev to suppress it.
> 
> -- checking for module 'libvotca_tools'
> --   package 'libvotca_tools' not found
> -- Found VOTCA_TOOLS: /usr/lib/x86_64-linux-gnu/libvotca_tools.so  
> -- Looking for VotcaToolsFromC in /usr/lib/x86_64-linux-gnu/libvotca_tools.so;
> -- Looking for VotcaToolsFromC in /usr/lib/x86_64-linux-gnu/libvotca_tools.so; - found
> -- Looking for assert.h
> -- Looking for assert.h - found
> -- Looking for C++ include algorithm
> -- Looking for C++ include algorithm - found
> -- Looking for C++ include fstream
> -- Looking for C++ include fstream - found
> -- Looking for C++ include iomanip
> -- Looking for C++ include iomanip - found
> -- Looking for C++ include iostream
> -- Looking for C++ include iostream - found
> -- Looking for C++ include list
> -- Looking for C++ include list - found
> -- Looking for C++ include map
> -- Looking for C++ include map - found
> -- Looking for C++ include numeric
> -- Looking for C++ include numeric - found
> -- Looking for C++ include sstream
> -- Looking for C++ include sstream - found
> -- Looking for C++ include stdexcept
> -- Looking for C++ include stdexcept - found
> -- Looking for C++ include string
> -- Looking for C++ include string - found
> -- Looking for C++ include vector
> -- Looking for C++ include vector - found
> -- Looking for C++ include cstdlib
> -- Looking for C++ include cstdlib - found
> -- Looking for sqrt in m
> -- Looking for sqrt in m - found
> -- checking for module 'libgmx'
> --   package 'libgmx' not found
> -- Could NOT find GROMACS (missing:  GROMACS_LIBRARY GROMACS_INCLUDE_DIR) 
> CMake Error at src/libcsg/CMakeLists.txt:25 (message):
>   gromacs not found, make sure you have installed at least the gromacs-4.0.7
>   and it's dev package.  If the gromacs module was not found above, make sure
>   you have sourced GMXRC or set PKG_CONFIG_PATH yourself.  If you have a
>   double precision version of gromacs enable to build against it with
>   -DGMX_DOUBLE=ON.  If you have gromacs-5.0 installed enable to build against
>   it with -DWITH_GMX_DEVEL=ON.  Gromacs support can be disable it with
>   -DWITH_GMX=OFF.
> 
> 
> -- Configuring incomplete, errors occurred!
> See also "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles/CMakeOutput.log".
> dh_auto_configure: cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DLIB=lib/x86_64-linux-gnu returned exit code 1
> debian/rules:17: recipe for target 'override_dh_auto_configure' failed
> make[1]: *** [override_dh_auto_configure] Error 2

The full build log is available from:
   http://aws-logs.debian.net/ftbfs-logs/2014/08/30/votca-csg_1.2.3-1_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures. The build
was done with DEB_BUILD_OPTIONS="parallel=4", so if your packaging tries
to support this, it might be a good idea to explore whether this might
be the cause of the failure.