[Debichem-devel] Bug#1028722: prody: FTBFS: AssertionError: 3205 != 3211 : selection 'abs(x) == sqrt(sq(x))' for Selection 'all' failed, expected 3211, selected 3205

[Adrian Bunk]

On Sat, Jan 14, 2023 at 01:42:10PM +0100, Lucas Nussbaum wrote:
> Source: prody
> Version: 2.3.1+dfsg-3
> Severity: serious
> Justification: FTBFS
> Tags: bookworm sid ftbfs
> User: lucas at debian.org
> Usertags: ftbfs-20230113 ftbfs-bookworm
> 
> Hi,
> 
> During a rebuild of all packages in sid, your package failed to build
> on amd64.
>...
> > ======================================================================
> > FAIL: testFunctionSelection13 (prody.tests.atomic.test_select.TestSelect)
> > Test function selections 'abs(x) == sqrt(sq(x))' for pdb3mht
> > ----------------------------------------------------------------------
> > Traceback (most recent call last):
> >   File "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic/test_select.py", line 442, in func
> >     self.assertEqual(len(sel), natoms,
> > AssertionError: 3205 != 3211 : selection 'abs(x) == sqrt(sq(x))' for AtomGroup 3mht failed, expected 3211, selected 3205
> > 
> > ======================================================================
> > FAIL: testFunctionSelection14 (prody.tests.atomic.test_select.TestSelect)
> > Test function selections "abs(x) == sqrt(sq(x))"
> > ----------------------------------------------------------------------
> > Traceback (most recent call last):
> >   File "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_prody/build/prody/tests/atomic/test_select.py", line 483, in func
> >     self.assertEqual(len(sel), natoms,
> > AssertionError: 3205 != 3211 : selection 'abs(x) == sqrt(sq(x))' for Selection 'all' failed, expected 3211, selected 3205
> > 
> > ----------------------------------------------------------------------
> > Ran 954 tests in 46.514s
> > 
> > FAILED (failures=2, skipped=37)
>...

Are you still able to reproduce this?

It built both on the buildds and in reproducible:
https://buildd.debian.org/status/package.php?p=prody
https://tests.reproducible-builds.org/debian/history/prody.html

Thanks
Adrian