[Neurodebian-users] Condor parallel problem

[Michael Hanke]

On Tue, Aug 14, 2012 at 10:51:09AM -0500, Eduardo Garza V. wrote:
> To source I wrote on the terminal "$. /etc/fsl/4.1/fsl.sh", which is the correct path. Is there anything else I need to do to source the config file? 
> Perhaps this is the issue and I'm doing it wrong.

No, that is all fine.

> > FSLPARALLEL should be set to 'condor'.
> > 
> > Is that the case?
> 
> Inside the file "fsl.sh" there is a paragraph dedicated to parallel processing using SGE.
> It says #FSLPARALLEL=1. My question is, do I have to modify the fsl.sh to say "FSLPARALLEL=condor" uncommented? 
> Or do I just write in terminal "$ export FSLPARALLEL=condor" to set the variable?

You can do both, while the latter is more flexible, as you can easily
decide on a case by case basis whether you want to utilize Condor or not
-- without having to edit a file.

Michael

-- 
Michael Hanke
http://mih.voxindeserto.de