[Neurodebian-users] Condor and Neurodebian

Arman Eshaghi arman.eshaghi at gmail.com
Sun Dec 29 10:13:44 UTC 2013


Thanks Michael and Yury. Your comments were really helpful, now we feel
brave enough to dump SGE :-)

All the best,
Arman


On Sun, Dec 29, 2013 at 12:11 PM, Yury V. Zaytsev <yury at shurup.com> wrote:

> Hi Arman,
>
> I personally don't use Condor, because I have a preference for SLURM and
> otherwise stick to TORQUE for primitive setups, but...
>
> On Sun, 2013-12-29 at 09:47 +0330, Arman Eshaghi wrote:
> >
> > 1- Does Condor work with other softwares such as Freesurfer and more
> > generally with any shell script (so users can submit custom shell
> > scripts, or even Nipype python parallelization)?
>
> It certainly does, see here for examples:
>
> http://research.cs.wisc.edu/htcondor/quick-start.html
>
> > 2. I would be much grateful if anyone can point me to a tutorial
> > webpage for configuration of servers (admin host in SGE terminology)
> > and other nodes (execution hosts in SGE terminology) so that multiple
> > nodes can work together.
>
> I would say that the official manual would be your first stop:
>
> http://research.cs.wisc.edu/htcondor/manual/v8.0/3_2Installation.html
>
> https://htcondor-wiki.cs.wisc.edu/index.cgi/wiki?p=HowToAdminRecipes
>
> The Debian packaging provided by NeuroDebian makes installation a lot
> easier, so be sure to first look into the documentation of the package
> and shipped pre-configured presets before doing it all on your own, but
> it's still useful to have an idea of what the manual setup would be
> like, so that you can understand how to customize the presets...
>
> HTH,
>
>
> --
> Sincerely yours,
> Yury V. Zaytsev
>
>
>
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>
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