[Neurodebian-users] problem with VM NeuroDebian and TBSS

[Yaroslav Halchenko]

$> tbss_1_preproc
zsh: command not found: tbss_1_preproc
$> man fsl 
# obtain ultimate knowledge
$> source /etc/fsl/4.1/fsl.sh 
$> tbss_1_preproc            

Usage: tbss_1_preproc <image1> <image2> ...


On Thu, 31 Jan 2013, Sandra Petris wrote:

>    Dear all,
>    I need to carry on a TBSS analysis therefore I did install the Virtual
>    MAchine of NeuroDebian and downloaded fsl 4.1 (it was somehow
>    preconfigured to dowload that version). Even if I can open the gui from
>    the terminal and visualize images with fslview, I cannot use the TBSS
>    scripts. For example if I run the �" tbss_1_preproc *nii.gz" and I am in
>    the folder where the Fa images are, the terminal says that the command is
>    not found......can anybody help me?.
>    Thanks a lot in advance and any advise will be greatly appreaciated
>    Best,
>    Sandra

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-- 
Yaroslav O. Halchenko
Postdoctoral Fellow,   Department of Psychological and Brain Sciences
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik